Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.31□□□□□ -2.04
USP9XQ93008 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USP9XQ93008 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
USP9XQ93008 SNORD62.1-201ENST00000362541 86 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 GSTA9P-201ENST00000406231 611 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 RANP7-201ENST00000418085 644 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 HMGN1P18-201ENST00000457642 277 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USP9XQ93008 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.3□□□□□ -2.04
USP9XQ93008 MTCYBP28-201ENST00000566728 1132 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 AL078603.1-201ENST00000603824 313 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.3□□□□□ -2.04
USP9XQ93008 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.3□□□□□ -2.04
USP9XQ93008 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
USP9XQ93008 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
USP9XQ93008 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.3□□□□□ -2.04
USP9XQ93008 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USP9XQ93008 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USP9XQ93008 SKINT1L-201ENST00000401057 817 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 OR2X1P-201ENST00000421144 687 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.3□□□□□ -2.04
USP9XQ93008 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.3□□□□□ -2.04
USP9XQ93008 RN7SKP24-201ENST00000515888 284 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 RNA5SP217-201ENST00000515959 91 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.3□□□□□ -2.04
USP9XQ93008 OR5AK3P-201ENST00000527486 1297 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 AC005951.1-201ENST00000576706 485 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 OR1AB1P-201ENST00000585564 761 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.3□□□□□ -2.04
USP9XQ93008 CDC27P2-201ENST00000425026 1922 ntBASIC2.3□□□□□ -2.04
USP9XQ93008 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
USP9XQ93008 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.29□□□□□ -2.04
USP9XQ93008 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
USP9XQ93008 RNU1-73P-201ENST00000383971 164 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 RNU6-1032P-201ENST00000384100 107 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 RPLP0P7-201ENST00000416050 667 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 AL121594.1-201ENST00000475906 575 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.29□□□□□ -2.04
USP9XQ93008 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.29□□□□□ -2.04
USP9XQ93008 AP000919.1-202ENST00000581139 1264 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 AC022069.1-201ENST00000582910 658 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USP9XQ93008 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC2.29□□□□□ -2.04
USP9XQ93008 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
USP9XQ93008 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.29□□□□□ -2.04
USP9XQ93008 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
USP9XQ93008 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USP9XQ93008 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USP9XQ93008 BTF3P4-201ENST00000418852 495 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 AC112220.1-201ENST00000434628 355 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 RPS15AP17-201ENST00000470598 390 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC2.29□□□□□ -2.04
USP9XQ93008 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.29□□□□□ -2.04
USP9XQ93008 AL391156.1-201ENST00000554965 554 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.29□□□□□ -2.04
USP9XQ93008 AC010928.3-201ENST00000587712 541 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 SNORA35B-201ENST00000607417 129 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.29□□□□□ -2.04
USP9XQ93008 MIR3199-2-201ENST00000636243 86 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USP9XQ93008 MTND5P3-201ENST00000438536 1800 ntBASIC2.29□□□□□ -2.04
USP9XQ93008 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USP9XQ93008 MIR625-201ENST00000385047 85 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 RN7SKP58-201ENST00000411010 305 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 YPEL5P1-201ENST00000419731 367 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.28□□□□□ -2.04
USP9XQ93008 RPS24P8-201ENST00000431490 402 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 TRIM60P13-201ENST00000432350 1283 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 AC108471.1-201ENST00000513977 287 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 SETP1-201ENST00000556014 845 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 TGIF1P1-201ENST00000558095 802 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.28□□□□□ -2.04
USP9XQ93008 Z82195.1-201ENST00000604558 398 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.28□□□□□ -2.04
USP9XQ93008 AL353684.1-201ENST00000622677 1120 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USP9XQ93008 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USP9XQ93008 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USP9XQ93008 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USP9XQ93008 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USP9XQ93008 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
USP9XQ93008 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
USP9XQ93008 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.28□□□□□ -2.04
USP9XQ93008 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC2.28□□□□□ -2.04
USP9XQ93008 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USP9XQ93008 RPS29P6-201ENST00000438196 145 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 RPS4XP11-201ENST00000446897 772 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 NPM1P49-201ENST00000448027 714 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USP9XQ93008 AC008716.1-201ENST00000511084 513 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
USP9XQ93008 FAM60DP-201ENST00000524174 632 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 7SK.7-201ENST00000603504 247 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 MIR7973-1-201ENST00000614683 76 ntBASIC2.28□□□□□ -2.04
USP9XQ93008 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
USP9XQ93008 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
USP9XQ93008 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
USP9XQ93008 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms