Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC022916.3-201ENST00000592961 742 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AC103792.1-201ENST00000603591 919 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AL031320.1-201ENST00000604177 357 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.15□□□□□ -1.59
ERCC4Q92889 AC025253.1-201ENST00000613623 543 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 SNX18P1Y-201ENST00000616231 511 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AL158209.2-201ENST00000619266 216 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.15□□□□□ -1.59
ERCC4Q92889 U6.101-201ENST00000637707 76 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AC099654.14-201ENST00000638599 341 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ERCC4Q92889 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ERCC4Q92889 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.15□□□□□ -1.59
ERCC4Q92889 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ERCC4Q92889 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
ERCC4Q92889 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ERCC4Q92889 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
ERCC4Q92889 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ERCC4Q92889 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ERCC4Q92889 RPL23AP57-201ENST00000332361 466 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 RNU4-12P-201ENST00000365233 139 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 Y_RNA.450-201ENST00000384198 113 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 RNU6-809P-201ENST00000384461 107 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 ARF4P3-201ENST00000397387 509 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 DSTNP4-201ENST00000399472 474 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 MIR1277-201ENST00000408536 78 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 AL160275.2-201ENST00000412010 394 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 AC140479.3-201ENST00000418944 1126 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 MTCYBP24-201ENST00000420387 1106 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 NPM1P34-201ENST00000428821 893 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.14□□□□□ -1.59
ERCC4Q92889 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.14□□□□□ -1.59
ERCC4Q92889 MTCO3P18-201ENST00000440206 761 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 RABEPKP1-201ENST00000440529 1026 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ERCC4Q92889 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ERCC4Q92889 ISCUP1-201ENST00000454451 448 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ERCC4Q92889 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.14□□□□□ -1.59
ERCC4Q92889 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.14□□□□□ -1.59
ERCC4Q92889 AL672167.3-201ENST00000465951 960 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ERCC4Q92889 AC108022.1-201ENST00000493466 478 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 AC025164.1-201ENST00000496249 478 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.14□□□□□ -1.59
ERCC4Q92889 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
ERCC4Q92889 AC074344.1-201ENST00000512823 224 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.14□□□□□ -1.59
ERCC4Q92889 COX6CP8-201ENST00000522620 226 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 AP003122.4-201ENST00000530980 758 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.14□□□□□ -1.59
ERCC4Q92889 RPL21P5-201ENST00000554662 472 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.14□□□□□ -1.59
ERCC4Q92889 AC137800.2-201ENST00000574375 120 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.14□□□□□ -1.59
ERCC4Q92889 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.14□□□□□ -1.59
ERCC4Q92889 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.14□□□□□ -1.59
ERCC4Q92889 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ERCC4Q92889 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ERCC4Q92889 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ERCC4Q92889 AC007390.2-201ENST00000606229 3803 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ERCC4Q92889 FARSBP1-201ENST00000435808 1778 ntBASIC5.14□□□□□ -1.59
ERCC4Q92889 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ERCC4Q92889 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.13□□□□□ -1.59
ERCC4Q92889 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
ERCC4Q92889 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
ERCC4Q92889 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.13□□□□□ -1.59
ERCC4Q92889 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ERCC4Q92889 OR4K15-201ENST00000305051 1216 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AC011155.1-201ENST00000316512 456 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
ERCC4Q92889 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ERCC4Q92889 SNORA51.6-201ENST00000384151 125 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AL603766.1-201ENST00000407763 664 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.13□□□□□ -1.59
ERCC4Q92889 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC4Q92889 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.13□□□□□ -1.59
ERCC4Q92889 NRBF2P3-201ENST00000432731 865 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AL772161.1-201ENST00000439130 476 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 RPL36AP15-201ENST00000444514 266 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 Z99127.3-201ENST00000448158 395 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.13□□□□□ -1.59
ERCC4Q92889 Z82190.1-201ENST00000454534 490 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC4Q92889 AC012170.1-201ENST00000495139 359 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AC112204.1-201ENST00000502591 103 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 KCTD9P5-201ENST00000504141 1170 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.13□□□□□ -1.59
ERCC4Q92889 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.13□□□□□ -1.59
ERCC4Q92889 RN7SKP276-201ENST00000516242 268 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 RNU6-1003P-201ENST00000517099 105 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC4Q92889 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.13□□□□□ -1.59
ERCC4Q92889 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.13□□□□□ -1.59
ERCC4Q92889 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC4Q92889 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ERCC4Q92889 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.13□□□□□ -1.59
ERCC4Q92889 AL133457.1-201ENST00000564251 987 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms