Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNED1Q8TER0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNED1Q8TER0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC068647.1-201ENST00000489539 2265 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 CR383658.2-201ENST00000547576 1525 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNED1Q8TER0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 OR52B1P-201ENST00000316506 909 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNED1Q8TER0 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNED1Q8TER0 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNED1Q8TER0 MTND4LP20-201ENST00000402379 270 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 SEPT2P1-201ENST00000419651 180 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AL139132.1-201ENST00000431587 344 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 MRPS18BP2-201ENST00000434310 759 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 UBE2D3P1-201ENST00000436669 444 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 ARF4P4-201ENST00000439608 520 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 MTCO2P7-201ENST00000446518 666 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 MTND1P27-201ENST00000451117 902 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC118282.2-201ENST00000508739 374 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 SNORA3.4-201ENST00000515969 96 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 PSMA2P1-201ENST00000526365 646 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC004923.2-201ENST00000529649 369 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC022882.1-201ENST00000532142 501 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 CYB5AP5-201ENST00000549779 389 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 HIGD1AP1-201ENST00000550979 275 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC025918.2-201ENST00000558683 763 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC009094.1-201ENST00000564443 426 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC124283.4-201ENST00000581815 456 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AL353778.1-201ENST00000603149 408 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC007390.2-201ENST00000606229 3803 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC068792.1-201ENST00000621354 417 ntBASIC4.04□□□□□ -1.76
SNED1Q8TER0 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.04□□□□□ -1.76
SNED1Q8TER0 AC021755.1-201ENST00000559747 1447 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC093536.2-201ENST00000565257 1406 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNED1Q8TER0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNED1Q8TER0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNED1Q8TER0 RNU4-31P-201ENST00000384211 141 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 ZNF603P-201ENST00000405613 487 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC013404.1-201ENST00000413068 249 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 RPS7P2-201ENST00000435134 607 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 HMGB1P16-201ENST00000447155 540 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 DNAJC19P1-201ENST00000455312 319 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC010683.1-201ENST00000473673 378 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC126121.1-201ENST00000482313 553 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 OR2A20P-203ENST00000498397 1268 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC113420.1-201ENST00000507903 571 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC010653.1-201ENST00000571108 881 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 AP005136.1-201ENST00000579765 429 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 NBR2-204ENST00000587322 63 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNED1Q8TER0 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.03□□□□□ -1.76
SNED1Q8TER0 AC092608.3-201ENST00000625017 386 ntBASIC4.03□□□□□ -1.76
SNED1Q8TER0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.03□□□□□ -1.77
SNED1Q8TER0 MTND4P26-201ENST00000415971 1359 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNED1Q8TER0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNED1Q8TER0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNED1Q8TER0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNED1Q8TER0 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNED1Q8TER0 RNU6-207P-201ENST00000384137 107 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 AL138880.1-201ENST00000405824 642 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms