Protein–RNA interactions for Protein: Q8NEL0

CCDC54, Coiled-coil domain-containing protein 54, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54Q8NEL0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 RNU6-582P-201ENST00000362989 107 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 U3.11-201ENST00000364476 212 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC234772.1-201ENST00000377927 937 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 RNU6-549P-201ENST00000384433 107 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 GSTA8P-201ENST00000404253 637 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC096533.1-201ENST00000411645 353 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AL035423.1-201ENST00000420331 213 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 OR2B8P-201ENST00000432841 938 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 RPS29P7-201ENST00000439662 171 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 Z99714.1-201ENST00000450463 807 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 RPS26P21-201ENST00000475397 348 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC005726.1-201ENST00000494679 427 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC016550.1-201ENST00000505348 785 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC118282.2-201ENST00000508739 374 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 RNU6-1073P-201ENST00000517182 106 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC087897.1-201ENST00000550134 156 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC034268.2-201ENST00000571784 482 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AL109653.1-201ENST00000603091 248 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC099676.1-201ENST00000608886 657 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC105227.2-201ENST00000615075 605 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC018926.1-201ENST00000616335 435 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AL357559.1-201ENST00000622228 274 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC011978.2-201ENST00000569835 2054 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 AC116096.1-201ENST00000566804 2314 ntBASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC54Q8NEL0 API5P2-201ENST00000397055 1498 ntBASIC2.96□□□□□ -1.93
CCDC54Q8NEL0 AL645568.2-201ENST00000432815 1337 ntBASIC2.96□□□□□ -1.93
CCDC54Q8NEL0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC54Q8NEL0 AL122126.1-201ENST00000546905 1318 ntBASIC2.96□□□□□ -1.93
CCDC54Q8NEL0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 U8.11-201ENST00000384699 133 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 U8.12-201ENST00000384701 133 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AL139098.1-201ENST00000407291 389 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 RN7SKP263-201ENST00000411194 309 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 UBE2V1P9-201ENST00000414760 368 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AL356968.1-201ENST00000416622 474 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 USP9YP21-201ENST00000420603 432 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 Z93242.1-201ENST00000427102 353 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 RPL21P40-201ENST00000428586 483 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 MTCYBP15-201ENST00000433123 1127 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 ISCA1P2-201ENST00000438679 421 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC002542.1-201ENST00000440683 193 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 NOTCH2P1-201ENST00000443481 624 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 Z99127.3-201ENST00000448158 395 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC125238.1-201ENST00000448842 249 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC104073.1-201ENST00000451988 151 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 NECAP1P2-201ENST00000455668 727 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 U8.18-201ENST00000459285 133 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 MTND3P3-201ENST00000505004 126 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 SUMO2P5-201ENST00000506790 245 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC048346.1-201ENST00000510247 144 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 FCF1P8-201ENST00000510322 597 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 MTCO3P44-201ENST00000510977 541 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC093752.1-206ENST00000511823 336 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 RN7SKP282-201ENST00000516824 299 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 MIR2276-201ENST00000516886 89 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC007991.1-201ENST00000522680 631 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 AC008507.1-201ENST00000587506 734 ntBASIC2.96□□□□□ -1.94
CCDC54Q8NEL0 OR4G1P-201ENST00000588632 938 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms