Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC89Q8N998 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC89Q8N998 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC89Q8N998 AC009643.1-201ENST00000532030 391 ntBASIC4.08□□□□□ -1.76
CCDC89Q8N998 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC89Q8N998 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC89Q8N998 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC89Q8N998 AC006116.5-201ENST00000591936 559 ntBASIC4.08□□□□□ -1.76
CCDC89Q8N998 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC89Q8N998 VN1R78P-201ENST00000597393 564 ntBASIC4.08□□□□□ -1.76
CCDC89Q8N998 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC89Q8N998 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC89Q8N998 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC89Q8N998 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC89Q8N998 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC89Q8N998 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC89Q8N998 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC89Q8N998 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC89Q8N998 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 AL031679.1-201ENST00000400616 525 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AL592310.1-201ENST00000414330 671 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AL354692.1-201ENST00000423044 315 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 SDCBPP1-201ENST00000440192 890 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 EEF1A1P39-201ENST00000440791 250 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 RAC1P7-201ENST00000445367 377 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 AL031313.1-201ENST00000448435 256 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 RPL26P28-201ENST00000451325 435 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 MTCO3P20-201ENST00000454926 688 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 OR10V3P-201ENST00000525712 725 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC091516.1-201ENST00000549191 703 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC89Q8N998 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC090615.1-201ENST00000577519 154 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 CCDC58P3-201ENST00000590792 430 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC068790.4-201ENST00000602474 263 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC006254.3-201ENST00000603353 884 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC004853.1-201ENST00000604902 698 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 ARF4P1-201ENST00000605447 541 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC008962.1-201ENST00000605729 304 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC016877.3-201ENST00000606778 504 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 MIR6868-201ENST00000611215 58 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC002076.2-201ENST00000617362 122 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 AL596245.1-201ENST00000618994 362 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 AC069209.1-201ENST00000619282 651 ntBASIC4.07□□□□□ -1.76
CCDC89Q8N998 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC89Q8N998 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 RNU1-18P-201ENST00000363062 164 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 RNA5SP399-201ENST00000364003 117 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 RN7SKP33-201ENST00000410942 340 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 TPT1P2-201ENST00000413105 503 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 RPL26P29-201ENST00000415623 438 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 RPS3AP37-201ENST00000419176 745 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 AC233728.2-201ENST00000425348 757 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 AL365396.1-201ENST00000430854 671 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC89Q8N998 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC89Q8N998 HIGD1AP11-201ENST00000438361 280 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 RANP8-201ENST00000444720 713 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 ARPC3P5-201ENST00000448802 534 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 AL136097.1-201ENST00000456945 913 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 AC104164.3-201ENST00000467363 1258 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 RPL7P38-201ENST00000488396 739 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 AL132838.2-201ENST00000492041 314 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 VN1R104P-201ENST00000505115 1009 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 MIR4509-3-201ENST00000578671 94 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 MIR5047-201ENST00000579212 100 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 MIR4509-2-201ENST00000583920 94 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC89Q8N998 AL139022.2-201ENST00000606934 443 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 AP002826.1-201ENST00000608835 315 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 AL391834.2-201ENST00000609982 546 ntBASIC4.06□□□□□ -1.76
CCDC89Q8N998 MIR4509-1-201ENST00000618224 94 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms