Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AC011468.4-201ENST00000603942 409 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AC013244.3-201ENST00000605614 388 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AC092650.2-201ENST00000619984 902 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AL732372.2-225ENST00000642124 456 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AC006504.1-201ENST00000562493 3666 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 RNU6-50P-201ENST00000362356 103 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 SNORA5A-201ENST00000384111 134 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 SNORA51.6-201ENST00000384151 125 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 KRR1P1-201ENST00000419430 803 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 SKP1P1-201ENST00000438081 489 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 CDC27P1-201ENST00000445384 715 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AL358794.1-201ENST00000445689 381 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 RPL7P52-201ENST00000449200 742 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 HMGN2P16-201ENST00000456802 261 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 USP9YP5-201ENST00000511770 630 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 SNORA48.10-201ENST00000516965 160 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 PAICSP4-201ENST00000517543 1253 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AC009101.1-201ENST00000568135 242 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AC034105.4-201ENST00000568304 277 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 MIR4509-3-201ENST00000578671 94 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 MIR4509-2-201ENST00000583920 94 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 SNORD84-203ENST00000584275 78 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 XIAPP1-201ENST00000603162 600 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AC063944.3-201ENST00000609969 533 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AL592148.2-201ENST00000612210 372 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 MIR4509-1-201ENST00000618224 94 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 CR392039.5-201ENST00000623201 510 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AL078595.3-201ENST00000623815 1166 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 AC092184.1-201ENST00000625042 715 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.72□□□□□ -1.81
RTL3Q8N8U3 MFSD8-236ENST00000641509 4050 ntBASIC3.72□□□□□ -1.81
RTL3Q8N8U3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
RTL3Q8N8U3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AL672296.1-201ENST00000427780 2158 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 NUP58P1-201ENST00000502546 1738 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 ANKRD36P1-201ENST00000344424 659 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 SNORD9-201ENST00000362566 104 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 RNU6-1300P-201ENST00000391046 108 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AP000567.1-201ENST00000406413 156 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 RNU2-28P-201ENST00000410457 189 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 DPRXP1-201ENST00000426312 460 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 MTCO1P53-201ENST00000441633 699 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 EXOSC3P1-201ENST00000448649 500 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 snoU13.4-201ENST00000458916 104 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 RPL7P15-201ENST00000461190 712 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AC013828.1-201ENST00000481845 158 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 SAP18P1-201ENST00000512058 390 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 RN7SKP18-201ENST00000516005 275 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 RNU6-579P-201ENST00000516879 102 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AC091163.3-201ENST00000518269 1144 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 TRMT10BP1-201ENST00000519377 943 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 MTCO3P15-201ENST00000526563 574 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 OR8I1P-201ENST00000529291 931 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms