Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 ISCUP1-201ENST00000454451 448 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 RPS4XP18-201ENST00000495480 763 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC010486.1-201ENST00000511793 424 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 IGKV1-32-201ENST00000519290 311 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 AP000790.1-201ENST00000528891 737 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 HPRT1P3-201ENST00000539521 576 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 AL845331.3-202ENST00000562856 261 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 HMGN1P30-201ENST00000589286 268 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC104785.1-201ENST00000603220 588 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC013553.2-201ENST00000604244 589 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC090948.2-201ENST00000607363 564 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 AP001521.1-201ENST00000609150 300 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 AL132765.2-201ENST00000610812 351 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 MIR6780A-201ENST00000615089 68 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 LINC01355-201ENST00000566551 5444 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VRK3Q8IV63 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VRK3Q8IV63 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VRK3Q8IV63 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 ZNF137P-201ENST00000456718 1920 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VRK3Q8IV63 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VRK3Q8IV63 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 Y_RNA.166-201ENST00000363730 102 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 SNORA51.2-201ENST00000364595 132 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 SNORA70F-201ENST00000384142 135 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 CYB5AP4-201ENST00000396692 399 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 MIR1271-201ENST00000408537 86 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 RN7SKP222-201ENST00000410651 315 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 MTND3P17-201ENST00000416968 344 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 PDCL2P1-201ENST00000419302 352 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AL353193.1-201ENST00000421444 268 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AC023347.2-201ENST00000433994 462 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 ARPC3P1-201ENST00000437218 533 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 RPS26P2-201ENST00000440331 348 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 AL445433.1-201ENST00000457507 257 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 RPL7AP52-201ENST00000458096 790 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 CYCSP34-201ENST00000458172 304 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 RNU7-27P-201ENST00000459281 62 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 RPS20P20-201ENST00000460498 340 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 MTND1P3-201ENST00000484956 952 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 RPL36AP51-201ENST00000487216 318 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AC106872.3-201ENST00000495104 446 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 RNU6-1003P-201ENST00000517099 105 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 AP006289.1-201ENST00000538089 277 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 HIF1AP1-201ENST00000553642 175 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 AC090751.1-201ENST00000566966 267 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AC022916.3-201ENST00000592961 742 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 VN1R80P-201ENST00000597126 338 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 CKS1BP3-201ENST00000600888 237 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AL161729.3-201ENST00000603533 673 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 AC022106.2-201ENST00000620114 757 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 AL160413.1-201ENST00000622780 310 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AC145207.9-201ENST00000623802 325 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 DDX18P4-201ENST00000511690 1966 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VRK3Q8IV63 MFSD8-216ENST00000641147 4009 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.5□□□□□ -1.69
VRK3Q8IV63 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms