Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 SNORD116.1-201ENST00000365628 92 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 RNU6-213P-201ENST00000384051 104 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 RNU2-71P-201ENST00000411395 189 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC019178.2-201ENST00000423595 505 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 ATP5F1P1-201ENST00000433775 569 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 MTND4P6-201ENST00000438297 472 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 RPL12P26-201ENST00000452430 487 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 USP9YP34-201ENST00000453983 808 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 snoU13.24-201ENST00000458998 104 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 RPS4XP15-201ENST00000489210 795 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 MTCYBP17-201ENST00000503579 789 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 RNU6-583P-201ENST00000516012 92 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 RNA5SP179-201ENST00000517284 121 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC245036.5-201ENST00000596330 847 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 DUXAP3-201ENST00000603616 594 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC091167.4-201ENST00000605079 184 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC009974.1-201ENST00000608881 455 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC131235.4-201ENST00000609288 620 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AC006023.2-201ENST00000609916 167 ntBASIC4.01□□□□□ -1.77
PRPF39Q86UA1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
PRPF39Q86UA1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF39Q86UA1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4□□□□□ -1.77
PRPF39Q86UA1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF39Q86UA1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4□□□□□ -1.77
PRPF39Q86UA1 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
PRPF39Q86UA1 RNU4-92P-201ENST00000363783 136 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 RNA5SP97-201ENST00000365006 84 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 CGA-201ENST00000369582 729 ntTSL 5 BASIC4□□□□□ -1.77
PRPF39Q86UA1 AC068533.2-201ENST00000411872 306 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AC092447.6-201ENST00000414578 210 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4□□□□□ -1.77
PRPF39Q86UA1 TIMM9P2-201ENST00000419324 266 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AL389915.1-201ENST00000422463 466 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AL049610.1-201ENST00000423374 372 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 USP9YP11-201ENST00000427537 717 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 HIGD1AP4-201ENST00000430194 280 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 RPL7P28-201ENST00000437739 740 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 HMGB1P37-201ENST00000439613 609 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4□□□□□ -1.77
PRPF39Q86UA1 VN1R34P-201ENST00000447387 883 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 RPS24P6-201ENST00000452670 400 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 MTCO3P11-201ENST00000455103 774 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 snoU109.4-201ENST00000458953 143 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 OR9M1P-201ENST00000459641 921 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 RPL21P104-201ENST00000464143 478 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AC091153.1-201ENST00000466297 402 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4□□□□□ -1.77
PRPF39Q86UA1 AP001086.1-201ENST00000494882 321 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AC114981.1-201ENST00000503897 678 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4□□□□□ -1.77
PRPF39Q86UA1 AC104986.1-201ENST00000517978 436 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 NDUFA5P2-201ENST00000519723 344 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AC087369.1-201ENST00000520775 996 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4□□□□□ -1.77
PRPF39Q86UA1 RFPL1S-203ENST00000539579 330 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4□□□□□ -1.77
PRPF39Q86UA1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4□□□□□ -1.77
PRPF39Q86UA1 AL512347.1-201ENST00000566420 503 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4□□□□□ -1.77
PRPF39Q86UA1 OR4K7P-201ENST00000580232 945 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4□□□□□ -1.77
PRPF39Q86UA1 AC009220.3-201ENST00000604318 586 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AC010738.1-201ENST00000604970 987 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AC069304.2-201ENST00000605154 435 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AC080013.4-201ENST00000607624 649 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 AL591424.2-201ENST00000617023 128 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4□□□□□ -1.77
PRPF39Q86UA1 AC068787.1-201ENST00000623908 691 ntBASIC4□□□□□ -1.77
PRPF39Q86UA1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4□□□□□ -1.77
PRPF39Q86UA1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4□□□□□ -1.77
PRPF39Q86UA1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF39Q86UA1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4□□□□□ -1.77
PRPF39Q86UA1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PRPF39Q86UA1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms