Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MIR8062-201ENST00000621515 85 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC144833.1-201ENST00000567953 4089 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 MTCO1P7-201ENST00000419523 1542 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 Y_RNA.60-201ENST00000362831 98 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 Y_RNA.485-201ENST00000384395 102 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AL590290.1-201ENST00000405336 380 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 NDUFS5P1-201ENST00000405668 289 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AL136131.1-201ENST00000406079 803 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 OR6C66P-201ENST00000414917 930 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 EIF4EP1-201ENST00000422311 642 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 PSMA6P3-201ENST00000428242 164 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AC010881.1-201ENST00000433830 235 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 DYNLT3P2-201ENST00000442517 295 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AL392103.1-201ENST00000447000 198 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 OR1H1P-201ENST00000448731 937 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 RNU6-1132P-201ENST00000459214 107 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AC091912.1-201ENST00000511351 248 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 COX6B1P6-201ENST00000522347 255 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AC068993.1-201ENST00000546724 589 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AC078899.3-201ENST00000599065 212 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 RNA5SP439-201ENST00000617595 124 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AC008013.2-202ENST00000637965 364 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AC091812.1-201ENST00000432235 1948 ntBASIC5.03□□□□□ -1.6
ATG4DQ86TL0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
ATG4DQ86TL0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 RNA5SP46-201ENST00000362370 120 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 Y_RNA.350-201ENST00000365409 98 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 SNORA70.6-201ENST00000383934 134 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 RNU6-472P-201ENST00000384299 107 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 Y_RNA.473-201ENST00000384333 102 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 RNU2-6P-201ENST00000411404 190 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 OR6E1P-201ENST00000414424 923 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 AL034379.1-201ENST00000423216 253 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 CHIAP3-201ENST00000423668 1133 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 COX6CP15-201ENST00000426313 211 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 OR6D1P-201ENST00000436165 939 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 AL450023.1-201ENST00000450868 751 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 NANOGP10-201ENST00000453325 895 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 RNU7-182P-201ENST00000459009 62 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 PABPC1P3-201ENST00000469174 459 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 AC090453.1-201ENST00000495560 436 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 Y_RNA.654-201ENST00000497848 106 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4DQ86TL0 MTND1P19-201ENST00000511780 315 ntBASIC5.02□□□□□ -1.61
ATG4DQ86TL0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms