Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 IGBP1P1-201ENST00000554337 1009 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AC004805.2-201ENST00000605382 482 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AL139099.4-201ENST00000614802 114 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AP001486.3-201ENST00000615334 372 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AL357559.1-201ENST00000622228 274 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 AL445363.3-201ENST00000623080 671 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 NXPH1-205ENST00000602349 1953 ntBASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SH3RF1Q7Z6J0 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AC011755.1-201ENST00000623763 2049 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AC004076.2-201ENST00000620532 3323 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 RNU6-562P-201ENST00000362731 107 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 RNA5SP507-201ENST00000363603 121 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 RNU1-136P-201ENST00000384181 164 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 MIR19A-201ENST00000384878 82 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 MIR450B-201ENST00000401182 78 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AL109755.1-201ENST00000401791 649 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 RNU4-46P-201ENST00000410818 138 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 RPL37P18-201ENST00000411602 243 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AL139095.3-201ENST00000419672 1203 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 E2F6P2-201ENST00000420708 748 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 NME1P1-201ENST00000420914 382 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 ARL5AP4-201ENST00000430731 512 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AC023141.8-201ENST00000442554 208 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 MED28P3-201ENST00000444288 531 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AC005229.2-201ENST00000456995 399 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AC092324.1-201ENST00000468671 324 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 HIGD1AP13-201ENST00000509878 289 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 RNU1-54P-201ENST00000517181 120 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 OR11H5P-201ENST00000554039 926 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 ATP1B3P1-201ENST00000605365 821 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 NANOGP3-201ENST00000605855 286 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AC009229.3-201ENST00000608056 282 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AC098479.1-201ENST00000609225 154 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AL138726.1-201ENST00000614873 333 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AC025034.2-201ENST00000623264 286 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 CR392039.4-201ENST00000624968 501 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 AC087516.1-201ENST00000561236 2428 ntBASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SH3RF1Q7Z6J0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 SNORA56-201ENST00000383966 129 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 RNU6-713P-201ENST00000384761 107 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 AC009804.1-201ENST00000400949 179 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 MTCO3P45-201ENST00000443036 613 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 RPS26P56-201ENST00000444468 240 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 AL031584.1-201ENST00000447169 754 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 RN7SL172P-201ENST00000460535 303 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 AC100832.1-201ENST00000471945 383 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 AC020893.1-201ENST00000502452 580 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 RPS27AP18-201ENST00000515536 459 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 RNU2-53P-201ENST00000516257 147 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 AL596245.1-201ENST00000618994 362 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 MIR8080-201ENST00000622224 89 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 AC055839.1-201ENST00000634467 498 ntBASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SH3RF1Q7Z6J0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms