Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 RNU6-882P-201ENST00000391025 103 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 MIR1179-201ENST00000408703 91 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 RNU4-65P-201ENST00000410473 140 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 RN7SKP33-201ENST00000410942 340 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 CCDC58P2-201ENST00000417131 366 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.3□□□□□ -1.72
ALFQ53S48 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.3□□□□□ -1.72
ALFQ53S48 AL590103.1-201ENST00000434488 307 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 EXTL2P1-201ENST00000446218 416 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 EEF1E1P1-201ENST00000446998 430 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.3□□□□□ -1.72
ALFQ53S48 RPL23AP62-201ENST00000463396 453 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.3□□□□□ -1.72
ALFQ53S48 AC106872.2-201ENST00000494303 480 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 AC103783.1-201ENST00000520506 373 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.3□□□□□ -1.72
ALFQ53S48 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
ALFQ53S48 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.3□□□□□ -1.72
ALFQ53S48 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.3□□□□□ -1.72
ALFQ53S48 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 AL133507.1-201ENST00000605269 557 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 AC013244.3-201ENST00000605614 388 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 AC103710.3-201ENST00000608157 948 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 AC106028.5-201ENST00000610332 395 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 AC064801.1-201ENST00000612025 407 ntBASIC4.3□□□□□ -1.72
ALFQ53S48 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ALFQ53S48 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ALFQ53S48 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.3□□□□□ -1.72
ALFQ53S48 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ALFQ53S48 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ALFQ53S48 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ALFQ53S48 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ALFQ53S48 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ALFQ53S48 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.3□□□□□ -1.72
ALFQ53S48 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
ALFQ53S48 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.3□□□□□ -1.72
ALFQ53S48 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ALFQ53S48 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.29□□□□□ -1.72
ALFQ53S48 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 AF117829.1-206ENST00000621883 3802 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ALFQ53S48 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
ALFQ53S48 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.29□□□□□ -1.72
ALFQ53S48 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 RNU6-343P-201ENST00000364709 104 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 SNORA70C-201ENST00000384538 135 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.29□□□□□ -1.72
ALFQ53S48 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.29□□□□□ -1.72
ALFQ53S48 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.29□□□□□ -1.72
ALFQ53S48 SNORA71B-202ENST00000439232 272 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AL591719.1-201ENST00000444669 744 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.29□□□□□ -1.72
ALFQ53S48 FABP3P2-201ENST00000453169 399 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AC234775.1-201ENST00000454247 670 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 RNA5SP246-201ENST00000458909 119 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 OR9M1P-201ENST00000459641 921 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AC103987.1-201ENST00000473394 348 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 PRELID3BP5-201ENST00000508612 460 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AC093824.1-201ENST00000508796 343 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.29□□□□□ -1.72
ALFQ53S48 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.29□□□□□ -1.72
ALFQ53S48 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.29□□□□□ -1.72
ALFQ53S48 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.29□□□□□ -1.72
ALFQ53S48 RN7SKP13-201ENST00000515933 244 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 RNU1-61P-201ENST00000516107 151 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 IGKV2D-23-201ENST00000518179 286 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.29□□□□□ -1.72
ALFQ53S48 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.29□□□□□ -1.72
ALFQ53S48 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.29□□□□□ -1.72
ALFQ53S48 OR4K8P-201ENST00000578842 1048 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.29□□□□□ -1.72
ALFQ53S48 AL353997.4-201ENST00000586196 166 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.29□□□□□ -1.72
ALFQ53S48 AC068790.5-201ENST00000602741 355 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AC011451.2-201ENST00000604303 598 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AL591034.3-201ENST00000605511 685 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AC090186.1-201ENST00000605991 572 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 RNU6-88P-201ENST00000606801 100 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 AC092354.2-201ENST00000607786 514 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.29□□□□□ -1.72
ALFQ53S48 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
ALFQ53S48 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.29□□□□□ -1.72
ALFQ53S48 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.29□□□□□ -1.72
ALFQ53S48 AC103706.2-201ENST00000638080 240 ntBASIC4.29□□□□□ -1.72
ALFQ53S48 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.29□□□□□ -1.72
ALFQ53S48 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.29□□□□□ -1.72
ALFQ53S48 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ALFQ53S48 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
ALFQ53S48 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms