Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 CR769767.1-201ENST00000436337 346 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.56□□□□□ -2
CCDC58Q4VC31 BX276092.4-201ENST00000452056 248 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.56□□□□□ -2
CCDC58Q4VC31 AC010301.1-201ENST00000473936 355 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 AC117440.1-201ENST00000474107 571 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 RN7SL293P-201ENST00000481765 281 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 HMGB1P22-201ENST00000505315 124 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 NAMPTP2-201ENST00000505629 1115 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.56□□□□□ -2
CCDC58Q4VC31 AC005351.1-201ENST00000511152 786 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 AC010285.3-201ENST00000511668 676 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.56□□□□□ -2
CCDC58Q4VC31 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.56□□□□□ -2
CCDC58Q4VC31 AP004371.1-201ENST00000525240 214 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.56□□□□□ -2
CCDC58Q4VC31 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.56□□□□□ -2
CCDC58Q4VC31 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.56□□□□□ -2
CCDC58Q4VC31 MTND4LP24-201ENST00000572277 291 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.56□□□□□ -2
CCDC58Q4VC31 AC024560.3-201ENST00000608482 349 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC58Q4VC31 AC103798.2-201ENST00000624292 632 ntBASIC2.56□□□□□ -2
CCDC58Q4VC31 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.56□□□□□ -2
CCDC58Q4VC31 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC58Q4VC31 DEFA7P-201ENST00000382676 285 ntBASIC2.55□□□□□ -2
CCDC58Q4VC31 MIR181A2-201ENST00000384863 110 ntBASIC2.55□□□□□ -2
CCDC58Q4VC31 ANAPC10P1-201ENST00000395991 556 ntBASIC2.55□□□□□ -2
CCDC58Q4VC31 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.55□□□□□ -2
CCDC58Q4VC31 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.55□□□□□ -2
CCDC58Q4VC31 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.55□□□□□ -2
CCDC58Q4VC31 AL035407.2-201ENST00000454090 378 ntBASIC2.55□□□□□ -2
CCDC58Q4VC31 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC58Q4VC31 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CCDC58Q4VC31 PRELID3BP5-201ENST00000508612 460 ntBASIC2.55□□□□□ -2
CCDC58Q4VC31 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.55□□□□□ -2
CCDC58Q4VC31 HIGD1AP3-201ENST00000515857 278 ntBASIC2.55□□□□□ -2
CCDC58Q4VC31 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.55□□□□□ -2
CCDC58Q4VC31 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC58Q4VC31 AC093536.2-201ENST00000565257 1406 ntBASIC2.55□□□□□ -2
CCDC58Q4VC31 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.55□□□□□ -2
CCDC58Q4VC31 AC106791.2-201ENST00000604680 391 ntBASIC2.55□□□□□ -2
CCDC58Q4VC31 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CCDC58Q4VC31 AC011890.2-201ENST00000613393 294 ntBASIC2.55□□□□□ -2
CCDC58Q4VC31 MIR7973-1-201ENST00000614683 76 ntBASIC2.55□□□□□ -2
CCDC58Q4VC31 RPL23AP61-201ENST00000623642 466 ntBASIC2.55□□□□□ -2
CCDC58Q4VC31 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCDC58Q4VC31 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.55□□□□□ -2
CCDC58Q4VC31 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCDC58Q4VC31 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC58Q4VC31 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC58Q4VC31 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.54□□□□□ -2
CCDC58Q4VC31 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC58Q4VC31 RNU6-317P-201ENST00000384031 107 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 RPS4XP7-201ENST00000406274 780 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 RNU2-21P-201ENST00000410368 188 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 RPS15AP40-201ENST00000419621 391 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.54□□□□□ -2
CCDC58Q4VC31 RPS7P2-201ENST00000435134 607 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.54□□□□□ -2
CCDC58Q4VC31 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.54□□□□□ -2
CCDC58Q4VC31 CDC27P1-201ENST00000445384 715 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 OR51B8P-201ENST00000449892 769 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.54□□□□□ -2
CCDC58Q4VC31 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC58Q4VC31 AL133372.1-201ENST00000493565 745 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.54□□□□□ -2
CCDC58Q4VC31 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.54□□□□□ -2
CCDC58Q4VC31 CIR1P1-201ENST00000524055 1133 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 OR4R1P-201ENST00000529879 463 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 AL355836.1-201ENST00000555951 870 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.54□□□□□ -2
CCDC58Q4VC31 AC106785.1-201ENST00000565935 262 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.54□□□□□ -2
CCDC58Q4VC31 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.54□□□□□ -2
CCDC58Q4VC31 AL160237.3-201ENST00000604114 1013 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.54□□□□□ -2
CCDC58Q4VC31 AL355493.4-201ENST00000618530 292 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CCDC58Q4VC31 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.54□□□□□ -2
CCDC58Q4VC31 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 ZNF807-201ENST00000328088 1707 ntBASIC2.54□□□□□ -2
CCDC58Q4VC31 AC024341.1-201ENST00000526444 1552 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 ZNF734P-201ENST00000419494 1534 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC58Q4VC31 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.53□□□□□ -2
CCDC58Q4VC31 MIR26A1-201ENST00000362205 77 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 SNORA63.1-201ENST00000362493 131 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 RNU6-851P-201ENST00000384565 107 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 MIR592-201ENST00000384959 97 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 MIR1193-201ENST00000408109 78 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 RNA5SP498-201ENST00000411342 120 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 AL137014.1-201ENST00000420490 1226 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.53□□□□□ -2
CCDC58Q4VC31 AC007064.3-201ENST00000422608 359 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 AL159987.2-201ENST00000432754 307 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.53□□□□□ -2
CCDC58Q4VC31 RPS24P6-201ENST00000452670 400 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms