Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNTN1Q12860 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNTN1Q12860 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CNTN1Q12860 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.61□□□□□ -1.83
CNTN1Q12860 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CNTN1Q12860 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CNTN1Q12860 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.61□□□□□ -1.83
CNTN1Q12860 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.61□□□□□ -1.83
CNTN1Q12860 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CNTN1Q12860 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
CNTN1Q12860 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CNTN1Q12860 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CNTN1Q12860 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.61□□□□□ -1.83
CNTN1Q12860 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.61□□□□□ -1.83
CNTN1Q12860 NACA3P-201ENST00000359690 648 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CNTN1Q12860 MIR34B-201ENST00000385076 84 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 RNU6-1242P-201ENST00000391052 103 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 ERHP2-201ENST00000402323 299 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 RPL23AP47-201ENST00000408017 460 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AL592310.1-201ENST00000414330 671 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AL161449.1-201ENST00000414531 1199 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 KRR1P1-201ENST00000419430 803 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.61□□□□□ -1.83
CNTN1Q12860 PSMA2P3-201ENST00000429685 675 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.61□□□□□ -1.83
CNTN1Q12860 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.61□□□□□ -1.83
CNTN1Q12860 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CNTN1Q12860 AL034418.1-201ENST00000448675 860 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 PPIAP3-201ENST00000450588 505 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AC099563.1-201ENST00000456086 418 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.61□□□□□ -1.83
CNTN1Q12860 AC011979.1-201ENST00000472300 483 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 MTCO3P35-201ENST00000485582 781 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AC108729.1-201ENST00000487812 947 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 RNF138P1-201ENST00000502765 546 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AC114322.1-201ENST00000506771 926 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 MTCYBP16-201ENST00000509187 1129 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.61□□□□□ -1.83
CNTN1Q12860 HIGD1AP3-201ENST00000515857 278 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.61□□□□□ -1.83
CNTN1Q12860 AP001189.2-201ENST00000527320 189 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AADACP1-206ENST00000561502 1193 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AL133457.1-201ENST00000564251 987 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.61□□□□□ -1.83
CNTN1Q12860 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.61□□□□□ -1.83
CNTN1Q12860 LLPHP1-201ENST00000603571 367 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AC007566.2-201ENST00000603642 413 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AC007179.3-201ENST00000604976 235 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AL450336.1-201ENST00000605180 586 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AL034351.1-201ENST00000605288 668 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.61□□□□□ -1.83
CNTN1Q12860 AC092954.1-201ENST00000609121 445 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.61□□□□□ -1.83
CNTN1Q12860 MIR7975-201ENST00000619350 68 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AL732618.1-201ENST00000623251 301 ntBASIC3.61□□□□□ -1.83
CNTN1Q12860 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CNTN1Q12860 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.61□□□□□ -1.83
CNTN1Q12860 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CNTN1Q12860 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.61□□□□□ -1.83
CNTN1Q12860 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.61□□□□□ -1.83
CNTN1Q12860 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CNTN1Q12860 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CNTN1Q12860 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CNTN1Q12860 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CNTN1Q12860 NMD3P1-201ENST00000439704 1488 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CNTN1Q12860 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CNTN1Q12860 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CNTN1Q12860 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.6□□□□□ -1.83
CNTN1Q12860 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CNTN1Q12860 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
CNTN1Q12860 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.6□□□□□ -1.83
CNTN1Q12860 PRO1804-201ENST00000623780 2050 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 RNA5SP72-201ENST00000364442 117 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.6□□□□□ -1.83
CNTN1Q12860 SNORA11.1-201ENST00000408133 129 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 RPL31P2-201ENST00000413849 377 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 SSR1P2-201ENST00000415208 787 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.6□□□□□ -1.83
CNTN1Q12860 RPL31P45-201ENST00000419532 356 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 MTND2P16-201ENST00000419987 799 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 MRPS36P1-201ENST00000421291 307 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.6□□□□□ -1.83
CNTN1Q12860 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.6□□□□□ -1.83
CNTN1Q12860 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 AP000907.1-201ENST00000428428 510 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.6□□□□□ -1.83
CNTN1Q12860 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.6□□□□□ -1.83
CNTN1Q12860 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.6□□□□□ -1.83
CNTN1Q12860 AC007327.1-201ENST00000447461 264 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.6□□□□□ -1.83
CNTN1Q12860 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.6□□□□□ -1.83
CNTN1Q12860 PLGLA-201ENST00000465668 449 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 AC108734.3-201ENST00000481241 1165 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.6□□□□□ -1.83
CNTN1Q12860 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.6□□□□□ -1.83
CNTN1Q12860 MTCYBP37-201ENST00000510642 1133 ntBASIC3.6□□□□□ -1.83
CNTN1Q12860 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.6□□□□□ -1.83
CNTN1Q12860 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms