Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RPL9P33-201ENST00000484311 566 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 RPL32P34-201ENST00000486380 400 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 RN7SL20P-201ENST00000488827 297 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 WBP1LP4-201ENST00000505043 344 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 RPL7L1P13-201ENST00000511702 739 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 RNU6-1004P-201ENST00000516584 111 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 SNORA31.15-201ENST00000516771 132 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC087373.1-201ENST00000524920 491 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC022690.1-201ENST00000526681 550 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 MIR5680-201ENST00000577577 84 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 MIR3670-2-201ENST00000582974 65 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 MIR3670-1-201ENST00000584160 65 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 MIR3670-3-201ENST00000584855 65 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC005242.1-201ENST00000585658 438 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC245036.5-201ENST00000596330 847 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC008739.3-201ENST00000603262 127 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC245389.1-201ENST00000605141 529 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AL133507.1-201ENST00000605269 557 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 MIR3670-4-201ENST00000612260 65 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC105227.2-201ENST00000615075 605 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC008083.4-201ENST00000615076 444 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 SNHG22-203ENST00000617833 660 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC018692.3-201ENST00000623929 123 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HIST1H1AQ02539 AL122126.1-201ENST00000546905 1318 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HIST1H1AQ02539 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.27□□□□□ -2.05
HIST1H1AQ02539 MIR7-3-201ENST00000384898 110 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 RNU6-244P-201ENST00000391028 104 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 AL121972.1-201ENST00000402023 252 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 RNU4-47P-201ENST00000410876 114 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 AC234782.4-201ENST00000417646 1048 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 BTF3P9-201ENST00000418784 283 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 HMGN2P30-201ENST00000423237 256 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 UBE2V1P6-201ENST00000430840 422 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 MTCYBP12-201ENST00000440559 1134 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 VN1R34P-201ENST00000447387 883 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 PRDX3P3-201ENST00000447765 522 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 AP000705.1-201ENST00000454567 350 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 BTF3P5-201ENST00000457252 467 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.27□□□□□ -2.05
HIST1H1AQ02539 CIR1P1-201ENST00000524055 1133 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.27□□□□□ -2.05
HIST1H1AQ02539 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HIST1H1AQ02539 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.27□□□□□ -2.05
HIST1H1AQ02539 MIR548Y-201ENST00000582739 110 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.27□□□□□ -2.05
HIST1H1AQ02539 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.27□□□□□ -2.05
HIST1H1AQ02539 AL031985.2-201ENST00000600955 480 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 AC084757.4-201ENST00000616350 526 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.27□□□□□ -2.05
HIST1H1AQ02539 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 MIR622-201ENST00000638396 96 ntBASIC2.27□□□□□ -2.05
HIST1H1AQ02539 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HIST1H1AQ02539 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HIST1H1AQ02539 AC099654.7-201ENST00000635788 2127 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 ASNSP3-201ENST00000451989 1306 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 OR5BR1P-201ENST00000524992 1330 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 MIR22-201ENST00000362190 85 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 RNA5SP72-201ENST00000364442 117 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 RNU6-629P-201ENST00000384061 103 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 SNORA7.4-201ENST00000384249 137 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 RNU6-185P-201ENST00000384421 107 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC092638.1-201ENST00000411966 1275 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AL451074.5-201ENST00000415894 435 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC005300.1-201ENST00000428401 373 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC005326.1-201ENST00000429197 123 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 YME1L1P1-201ENST00000429435 297 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.26□□□□□ -2.05
HIST1H1AQ02539 LSM1P1-201ENST00000438629 273 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AL591503.2-201ENST00000442314 1005 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 Z75741.1-201ENST00000446793 314 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AP002345.1-201ENST00000456493 928 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.26□□□□□ -2.05
HIST1H1AQ02539 RPS17P11-201ENST00000474297 293 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 OR2A20P-203ENST00000498397 1268 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 PRELID3BP6-201ENST00000503839 571 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC105914.1-201ENST00000511798 226 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC034244.2-201ENST00000514668 858 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.26□□□□□ -2.05
HIST1H1AQ02539 RNU6-1308P-201ENST00000516817 103 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.26□□□□□ -2.05
HIST1H1AQ02539 IGKV2-36-201ENST00000519999 223 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC104115.2-201ENST00000523026 687 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.26□□□□□ -2.05
HIST1H1AQ02539 CCDC58P3-201ENST00000590792 430 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AC020895.1-201ENST00000595362 272 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 RPL23AP78-201ENST00000599928 470 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms