Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.66□□□□□ -1.82
CCNA1P78396 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCNA1P78396 MT-TC-201ENST00000387405 66 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 ARF4P3-201ENST00000397387 509 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 RPL31P1-201ENST00000398116 372 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 RNU6-272P-201ENST00000411028 104 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 RPL23AP82-202ENST00000427528 469 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.66□□□□□ -1.82
CCNA1P78396 RPS27P5-201ENST00000444247 244 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.66□□□□□ -1.82
CCNA1P78396 NPM1P13-201ENST00000452663 865 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 CENPBD1P1-201ENST00000464061 469 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 ACTG1P13-201ENST00000486987 1043 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 AC021146.1-201ENST00000511202 716 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.66□□□□□ -1.82
CCNA1P78396 RNU1-61P-201ENST00000516107 151 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 IGHV3-76-201ENST00000522465 295 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.66□□□□□ -1.82
CCNA1P78396 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.66□□□□□ -1.82
CCNA1P78396 VIS1.1-201ENST00000610517 203 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCNA1P78396 AC020923.1-201ENST00000624021 917 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.66□□□□□ -1.82
CCNA1P78396 MTCO1P18-201ENST00000455518 1419 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 AC000403.1-201ENST00000613696 3585 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCNA1P78396 AL359893.1-201ENST00000447628 1580 ntBASIC3.66□□□□□ -1.82
CCNA1P78396 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCNA1P78396 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CCNA1P78396 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.66□□□□□ -1.82
CCNA1P78396 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCNA1P78396 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCNA1P78396 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCNA1P78396 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CCNA1P78396 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CCNA1P78396 ENSAP3-201ENST00000312710 333 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 RPL30P2-201ENST00000414021 291 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 HMGB3P23-201ENST00000414981 585 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CCNA1P78396 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 Z99714.1-201ENST00000450463 807 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 RPS24P6-201ENST00000452670 400 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.65□□□□□ -1.83
CCNA1P78396 RPS4XP2-201ENST00000458402 793 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 snoU13.3-201ENST00000459441 104 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 CABYRP1-201ENST00000465493 1045 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 AC104108.1-201ENST00000509930 412 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.65□□□□□ -1.83
CCNA1P78396 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNA1P78396 PDCL2P2-201ENST00000533651 189 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.65□□□□□ -1.83
CCNA1P78396 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.65□□□□□ -1.83
CCNA1P78396 AC027807.1-201ENST00000559921 996 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.65□□□□□ -1.83
CCNA1P78396 AC034105.3-201ENST00000565294 442 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.65□□□□□ -1.83
CCNA1P78396 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.65□□□□□ -1.83
CCNA1P78396 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCNA1P78396 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCNA1P78396 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCNA1P78396 PWAR6-201ENST00000552334 4618 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 AL355578.1-201ENST00000607405 1328 ntBASIC3.65□□□□□ -1.83
CCNA1P78396 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCNA1P78396 AC004925.1-201ENST00000624256 2706 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
CCNA1P78396 SNORA71.1-201ENST00000364523 117 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCNA1P78396 DEFB109C-201ENST00000382575 264 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 DEFB109B-201ENST00000382656 264 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 AL136116.1-201ENST00000403591 381 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.64□□□□□ -1.83
CCNA1P78396 RNU4-65P-201ENST00000410473 140 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 RPS3AP9-201ENST00000417027 792 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 TOMM22P1-201ENST00000418578 312 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 RPS7P2-201ENST00000435134 607 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNA1P78396 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.64□□□□□ -1.83
CCNA1P78396 SSXP4-201ENST00000451349 245 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNA1P78396 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNA1P78396 AC133963.2-201ENST00000513686 578 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 AF279873.1-201ENST00000523393 313 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.64□□□□□ -1.83
CCNA1P78396 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCNA1P78396 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNA1P78396 MIR4738-201ENST00000579134 87 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNA1P78396 AC008687.2-201ENST00000597865 520 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 AL355812.1-201ENST00000603215 216 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms