Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RPL5P24-201ENST00000463742 885 ntBASIC3.32□□□□□ -1.88
LMO4P61968 RPL37P6-202ENST00000464216 403 ntBASIC3.32□□□□□ -1.88
LMO4P61968 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
LMO4P61968 CDC42P4-201ENST00000510507 563 ntBASIC3.32□□□□□ -1.88
LMO4P61968 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
LMO4P61968 RN7SKP234-201ENST00000517173 224 ntBASIC3.32□□□□□ -1.88
LMO4P61968 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO4P61968 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.32□□□□□ -1.88
LMO4P61968 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.32□□□□□ -1.88
LMO4P61968 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.32□□□□□ -1.88
LMO4P61968 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO4P61968 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO4P61968 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.32□□□□□ -1.88
LMO4P61968 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO4P61968 AL121834.1-201ENST00000572284 509 ntBASIC3.32□□□□□ -1.88
LMO4P61968 MIR4444-1-201ENST00000581696 74 ntBASIC3.32□□□□□ -1.88
LMO4P61968 MIR4444-2-201ENST00000584390 74 ntBASIC3.32□□□□□ -1.88
LMO4P61968 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.32□□□□□ -1.88
LMO4P61968 AC008507.1-201ENST00000587506 734 ntBASIC3.32□□□□□ -1.88
LMO4P61968 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.32□□□□□ -1.88
LMO4P61968 BNIP3P33-201ENST00000598912 569 ntBASIC3.32□□□□□ -1.88
LMO4P61968 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO4P61968 AL451044.1-201ENST00000604867 238 ntBASIC3.32□□□□□ -1.88
LMO4P61968 MIR92B-201ENST00000607575 96 ntBASIC3.32□□□□□ -1.88
LMO4P61968 AC105429.2-201ENST00000610567 517 ntBASIC3.32□□□□□ -1.88
LMO4P61968 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.32□□□□□ -1.88
LMO4P61968 AL136981.2-201ENST00000617319 734 ntBASIC3.32□□□□□ -1.88
LMO4P61968 AC069209.1-201ENST00000619282 651 ntBASIC3.32□□□□□ -1.88
LMO4P61968 AC039056.2-201ENST00000622261 511 ntBASIC3.32□□□□□ -1.88
LMO4P61968 AC127502.3-201ENST00000636170 1206 ntBASIC3.32□□□□□ -1.88
LMO4P61968 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LMO4P61968 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.32□□□□□ -1.88
LMO4P61968 AC012020.1-201ENST00000624541 1728 ntBASIC3.32□□□□□ -1.88
LMO4P61968 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
LMO4P61968 SCN1A-220ENST00000641603 12506 ntBASIC3.32□□□□□ -1.88
LMO4P61968 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LMO4P61968 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LMO4P61968 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.31□□□□□ -1.88
LMO4P61968 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.31□□□□□ -1.88
LMO4P61968 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LMO4P61968 Z82217.1-201ENST00000625157 8149 ntBASIC3.31□□□□□ -1.88
LMO4P61968 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LMO4P61968 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LMO4P61968 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LMO4P61968 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
LMO4P61968 AC095050.2-201ENST00000510748 1458 ntBASIC3.31□□□□□ -1.88
LMO4P61968 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.31□□□□□ -1.88
LMO4P61968 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.31□□□□□ -1.88
LMO4P61968 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LMO4P61968 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.31□□□□□ -1.88
LMO4P61968 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LMO4P61968 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.31□□□□□ -1.88
LMO4P61968 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.31□□□□□ -1.88
LMO4P61968 MIR16-1-201ENST00000385271 89 ntBASIC3.31□□□□□ -1.88
LMO4P61968 ATP5F1P4-201ENST00000397288 746 ntBASIC3.31□□□□□ -1.88
LMO4P61968 TMSB4XP8-201ENST00000402089 135 ntBASIC3.31□□□□□ -1.88
LMO4P61968 RNU2-21P-201ENST00000410368 188 ntBASIC3.31□□□□□ -1.88
LMO4P61968 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.31□□□□□ -1.88
LMO4P61968 OR51A3P-201ENST00000413596 924 ntBASIC3.31□□□□□ -1.88
LMO4P61968 AL161449.1-201ENST00000414531 1199 ntBASIC3.31□□□□□ -1.88
LMO4P61968 TMSB4XP6-201ENST00000415187 135 ntBASIC3.31□□□□□ -1.88
LMO4P61968 RPL31P45-201ENST00000419532 356 ntBASIC3.31□□□□□ -1.88
LMO4P61968 RPS12P23-201ENST00000419579 400 ntBASIC3.31□□□□□ -1.88
LMO4P61968 Z99497.1-201ENST00000421282 135 ntBASIC3.31□□□□□ -1.88
LMO4P61968 TMSB4XP1-201ENST00000424567 135 ntBASIC3.31□□□□□ -1.88
LMO4P61968 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LMO4P61968 MTCO1P54-201ENST00000430139 712 ntBASIC3.31□□□□□ -1.88
LMO4P61968 AL445584.1-201ENST00000431451 330 ntBASIC3.31□□□□□ -1.88
LMO4P61968 MTND1P30-201ENST00000441241 901 ntBASIC3.31□□□□□ -1.88
LMO4P61968 USP9YP29-201ENST00000445112 563 ntBASIC3.31□□□□□ -1.88
LMO4P61968 AL500522.2-201ENST00000448562 343 ntBASIC3.31□□□□□ -1.88
LMO4P61968 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO4P61968 FABP3P2-201ENST00000453169 399 ntBASIC3.31□□□□□ -1.88
LMO4P61968 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.31□□□□□ -1.88
LMO4P61968 CFTRP1-201ENST00000456646 183 ntBASIC3.31□□□□□ -1.88
LMO4P61968 RPS15AP1-201ENST00000457423 391 ntBASIC3.31□□□□□ -1.88
LMO4P61968 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO4P61968 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LMO4P61968 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.31□□□□□ -1.88
LMO4P61968 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.31□□□□□ -1.88
LMO4P61968 AL139099.1-201ENST00000497398 403 ntBASIC3.31□□□□□ -1.88
LMO4P61968 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LMO4P61968 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO4P61968 RNA5SP179-201ENST00000517284 121 ntBASIC3.31□□□□□ -1.88
LMO4P61968 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO4P61968 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.31□□□□□ -1.88
LMO4P61968 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
LMO4P61968 AP001317.1-201ENST00000531194 960 ntBASIC3.31□□□□□ -1.88
LMO4P61968 YPEL5P3-201ENST00000547227 352 ntBASIC3.31□□□□□ -1.88
LMO4P61968 CCNG2P1-201ENST00000549521 1000 ntBASIC3.31□□□□□ -1.88
LMO4P61968 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO4P61968 AL133241.1-201ENST00000556832 487 ntBASIC3.31□□□□□ -1.88
LMO4P61968 AC234778.2-201ENST00000566241 354 ntBASIC3.31□□□□□ -1.88
LMO4P61968 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO4P61968 MIR4504-201ENST00000577413 92 ntBASIC3.31□□□□□ -1.88
LMO4P61968 MTND1P15-201ENST00000579262 949 ntBASIC3.31□□□□□ -1.88
LMO4P61968 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO4P61968 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.31□□□□□ -1.88
LMO4P61968 AC083899.3-201ENST00000603413 594 ntBASIC3.31□□□□□ -1.88
LMO4P61968 LLPHP1-201ENST00000603571 367 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms