Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RPS3AP61247 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.98□□□□□ -1.77
RPS3AP61247 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RPS3AP61247 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RPS3AP61247 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.98□□□□□ -1.77
RPS3AP61247 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
RPS3AP61247 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RPS3AP61247 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPS3AP61247 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPS3AP61247 RNA5SP509-201ENST00000364577 119 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 RNU6-343P-201ENST00000364709 104 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 RNA5SP88-201ENST00000365560 109 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 RNU6-723P-201ENST00000383973 107 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 MIR3065-201ENST00000390137 79 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.98□□□□□ -1.77
RPS3AP61247 SNRPFP1-201ENST00000414761 252 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RPS3AP61247 CHIAP3-201ENST00000423668 1133 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 MTND4P20-201ENST00000424125 869 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 C4BPAP2-201ENST00000428434 478 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.98□□□□□ -1.77
RPS3AP61247 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.98□□□□□ -1.77
RPS3AP61247 RPEP2-201ENST00000432149 701 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.98□□□□□ -1.77
RPS3AP61247 MTCYBP45-201ENST00000435243 565 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AL138799.3-201ENST00000438968 350 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 RPL23AP89-201ENST00000439324 255 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RPS3AP61247 TPT1P12-201ENST00000448968 492 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 Z82190.1-201ENST00000454534 490 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 RN7SL98P-201ENST00000462271 300 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AC011276.1-201ENST00000469688 323 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AC010285.1-201ENST00000470580 392 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 RPS3AP22-201ENST00000488297 769 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.98□□□□□ -1.77
RPS3AP61247 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.98□□□□□ -1.77
RPS3AP61247 AC108064.1-201ENST00000513791 460 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AC093677.1-201ENST00000514414 678 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 RNU6-1095P-201ENST00000516148 108 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 RNU6-678P-201ENST00000516832 109 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 IGHV3-32-201ENST00000519182 355 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AC109635.4-202ENST00000531666 412 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 TOMM20P2-201ENST00000540082 421 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 CBX3P5-201ENST00000552017 521 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.98□□□□□ -1.77
RPS3AP61247 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.98□□□□□ -1.77
RPS3AP61247 AC012669.1-201ENST00000603209 283 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AC018714.1-201ENST00000605028 208 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AL360219.1-201ENST00000610230 366 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 uc_338.13-201ENST00000618243 179 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 AP001350.1-201ENST00000601906 1524 ntBASIC3.98□□□□□ -1.77
RPS3AP61247 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPS3AP61247 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPS3AP61247 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.97□□□□□ -1.77
RPS3AP61247 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPS3AP61247 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.97□□□□□ -1.77
RPS3AP61247 LINC02471-203ENST00000641941 4752 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 USP8P1-201ENST00000494673 3183 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.97□□□□□ -1.77
RPS3AP61247 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.97□□□□□ -1.77
RPS3AP61247 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RPS3AP61247 AL161781.1-201ENST00000354277 403 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 RNA5SP307-201ENST00000362863 116 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 SNORA51.2-201ENST00000364595 132 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 SNORA62-201ENST00000365493 153 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 RPS20P14-201ENST00000412545 360 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.97□□□□□ -1.77
RPS3AP61247 AC011933.1-201ENST00000413334 321 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPS3AP61247 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.97□□□□□ -1.77
RPS3AP61247 VPS26BP1-201ENST00000417155 755 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 PTP4A1P5-201ENST00000420305 455 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 COX6CP17-201ENST00000421389 185 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.97□□□□□ -1.77
RPS3AP61247 AL593851.1-201ENST00000426171 157 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 RPS29P17-201ENST00000430795 166 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.97□□□□□ -1.77
RPS3AP61247 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.97□□□□□ -1.77
RPS3AP61247 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.97□□□□□ -1.77
RPS3AP61247 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 UBE2V1P3-201ENST00000439651 417 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 MTCO1P27-201ENST00000448269 226 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.97□□□□□ -1.77
RPS3AP61247 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.97□□□□□ -1.77
RPS3AP61247 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.97□□□□□ -1.77
RPS3AP61247 snoU13.24-201ENST00000458998 104 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 AC116533.1-201ENST00000459748 321 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.97□□□□□ -1.77
RPS3AP61247 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.97□□□□□ -1.77
RPS3AP61247 AC093809.1-201ENST00000509155 340 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 MRPS33P3-201ENST00000513456 322 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 NARSP2-201ENST00000518524 679 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPS3AP61247 OR5D17P-201ENST00000531492 978 ntBASIC3.97□□□□□ -1.77
RPS3AP61247 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPS3AP61247 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.97□□□□□ -1.77
RPS3AP61247 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms