Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.22□□□□□ -1.89
LIM2P55344 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.22□□□□□ -1.89
LIM2P55344 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.22□□□□□ -1.89
LIM2P55344 AC005345.1-201ENST00000431868 217 ntBASIC3.22□□□□□ -1.89
LIM2P55344 HMGB3P6-201ENST00000444896 598 ntBASIC3.22□□□□□ -1.89
LIM2P55344 HMGN2P21-201ENST00000447764 270 ntBASIC3.22□□□□□ -1.89
LIM2P55344 AC097262.1-201ENST00000452559 548 ntBASIC3.22□□□□□ -1.89
LIM2P55344 SNRPGP5-201ENST00000456003 220 ntBASIC3.22□□□□□ -1.89
LIM2P55344 snoU109.3-201ENST00000459477 145 ntBASIC3.22□□□□□ -1.89
LIM2P55344 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.22□□□□□ -1.89
LIM2P55344 RPL23AP67-201ENST00000465341 474 ntBASIC3.22□□□□□ -1.89
LIM2P55344 AC078817.1-201ENST00000492623 435 ntBASIC3.22□□□□□ -1.89
LIM2P55344 RPL21P131-201ENST00000497298 483 ntBASIC3.22□□□□□ -1.89
LIM2P55344 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LIM2P55344 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LIM2P55344 FCF1P8-201ENST00000510322 597 ntBASIC3.22□□□□□ -1.89
LIM2P55344 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.22□□□□□ -1.89
LIM2P55344 SCARNA1-201ENST00000517138 166 ntBASIC3.22□□□□□ -1.89
LIM2P55344 IGHV3-32-201ENST00000519182 355 ntBASIC3.22□□□□□ -1.89
LIM2P55344 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.22□□□□□ -1.89
LIM2P55344 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.22□□□□□ -1.89
LIM2P55344 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.22□□□□□ -1.89
LIM2P55344 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.22□□□□□ -1.89
LIM2P55344 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.22□□□□□ -1.89
LIM2P55344 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.22□□□□□ -1.89
LIM2P55344 AC122134.1-202ENST00000569111 1201 ntBASIC3.22□□□□□ -1.89
LIM2P55344 MIR5186-201ENST00000577504 120 ntBASIC3.22□□□□□ -1.89
LIM2P55344 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.22□□□□□ -1.89
LIM2P55344 AL139286.1-201ENST00000604465 483 ntBASIC3.22□□□□□ -1.89
LIM2P55344 AC069545.1-201ENST00000605671 358 ntBASIC3.22□□□□□ -1.89
LIM2P55344 AC121761.2-201ENST00000617300 689 ntBASIC3.22□□□□□ -1.89
LIM2P55344 AC110801.1-201ENST00000623590 212 ntBASIC3.22□□□□□ -1.89
LIM2P55344 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.22□□□□□ -1.89
LIM2P55344 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.22□□□□□ -1.89
LIM2P55344 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
LIM2P55344 AC106871.1-201ENST00000568324 3102 ntBASIC3.22□□□□□ -1.89
LIM2P55344 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.89
LIM2P55344 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
LIM2P55344 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
LIM2P55344 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
LIM2P55344 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.21□□□□□ -1.89
LIM2P55344 AC130650.2-201ENST00000618736 2403 ntBASIC3.21□□□□□ -1.9
LIM2P55344 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LIM2P55344 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LIM2P55344 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LIM2P55344 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LIM2P55344 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
LIM2P55344 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LIM2P55344 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LIM2P55344 RNU6-925P-201ENST00000384629 104 ntBASIC3.21□□□□□ -1.9
LIM2P55344 MIR506-201ENST00000384998 124 ntBASIC3.21□□□□□ -1.9
LIM2P55344 MIR122-201ENST00000385044 85 ntBASIC3.21□□□□□ -1.9
LIM2P55344 MIR670-201ENST00000390142 98 ntBASIC3.21□□□□□ -1.9
LIM2P55344 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LIM2P55344 RNU6-1300P-201ENST00000391046 108 ntBASIC3.21□□□□□ -1.9
LIM2P55344 EI24P1-201ENST00000416584 867 ntBASIC3.21□□□□□ -1.9
LIM2P55344 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.21□□□□□ -1.9
LIM2P55344 C1DP1-201ENST00000426049 402 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.21□□□□□ -1.9
LIM2P55344 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.21□□□□□ -1.9
LIM2P55344 AC008264.1-201ENST00000447612 367 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.21□□□□□ -1.9
LIM2P55344 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.21□□□□□ -1.9
LIM2P55344 AC087312.1-201ENST00000471411 480 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.21□□□□□ -1.9
LIM2P55344 AC096571.1-202ENST00000506634 735 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AC093752.1-206ENST00000511823 336 ntBASIC3.21□□□□□ -1.9
LIM2P55344 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.21□□□□□ -1.9
LIM2P55344 AP001207.2-201ENST00000519490 539 ntBASIC3.21□□□□□ -1.9
LIM2P55344 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.21□□□□□ -1.9
LIM2P55344 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.21□□□□□ -1.9
LIM2P55344 CCNG2P1-201ENST00000549521 1000 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.21□□□□□ -1.9
LIM2P55344 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.21□□□□□ -1.9
LIM2P55344 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.21□□□□□ -1.9
LIM2P55344 AC008507.1-201ENST00000587506 734 ntBASIC3.21□□□□□ -1.9
LIM2P55344 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.21□□□□□ -1.9
LIM2P55344 AC096947.1-201ENST00000603233 470 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AC008739.3-201ENST00000603262 127 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AC069431.2-201ENST00000604149 1099 ntBASIC3.21□□□□□ -1.9
LIM2P55344 HSPE1P14-201ENST00000605812 302 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AL355365.1-201ENST00000616480 294 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AC010975.3-201ENST00000618727 978 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AL713922.2-201ENST00000619384 716 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AC090772.4-201ENST00000623599 362 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.21□□□□□ -1.9
LIM2P55344 AC127502.3-201ENST00000636170 1206 ntBASIC3.21□□□□□ -1.9
LIM2P55344 ZNF37BP-203ENST00000452306 1352 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AC116096.1-201ENST00000566804 2314 ntBASIC3.21□□□□□ -1.9
LIM2P55344 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LIM2P55344 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LIM2P55344 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LIM2P55344 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.2□□□□□ -1.9
LIM2P55344 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIM2P55344 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIM2P55344 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIM2P55344 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIM2P55344 PWAR6-201ENST00000552334 4618 ntBASIC3.2□□□□□ -1.9
LIM2P55344 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.2□□□□□ -1.9
LIM2P55344 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms