Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NR1H2P55055 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NR1H2P55055 Y_RNA.18-201ENST00000362461 102 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 SNORA70.2-201ENST00000364506 135 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NR1H2P55055 CYCSP45-201ENST00000402289 315 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 RN7SKP267-201ENST00000410381 285 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 AMD1P2-201ENST00000412936 992 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.16□□□□□ -1.74
NR1H2P55055 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.16□□□□□ -1.74
NR1H2P55055 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.16□□□□□ -1.74
NR1H2P55055 AL390023.1-201ENST00000428836 262 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.16□□□□□ -1.74
NR1H2P55055 AL138799.3-201ENST00000438968 350 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 MTND5P14-201ENST00000441481 1267 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.16□□□□□ -1.74
NR1H2P55055 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.16□□□□□ -1.74
NR1H2P55055 snoU13.24-201ENST00000458998 104 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.16□□□□□ -1.74
NR1H2P55055 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.16□□□□□ -1.74
NR1H2P55055 SNORA31.20-201ENST00000517111 133 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.16□□□□□ -1.74
NR1H2P55055 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.16□□□□□ -1.74
NR1H2P55055 TOMM20P2-201ENST00000540082 421 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.16□□□□□ -1.74
NR1H2P55055 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.16□□□□□ -1.74
NR1H2P55055 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
NR1H2P55055 PIGPP4-201ENST00000584447 307 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.16□□□□□ -1.74
NR1H2P55055 AL353997.4-201ENST00000586196 166 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 AC110760.3-201ENST00000598794 467 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 DUXAP11-201ENST00000603858 526 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 AL031176.1-201ENST00000604554 466 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 AC004825.2-201ENST00000616634 455 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 AF246928.1-201ENST00000623768 87 ntBASIC4.16□□□□□ -1.74
NR1H2P55055 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NR1H2P55055 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NR1H2P55055 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
NR1H2P55055 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NR1H2P55055 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
NR1H2P55055 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
NR1H2P55055 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NR1H2P55055 MFSD8-242ENST00000641690 4199 ntBASIC4.15□□□□□ -1.74
NR1H2P55055 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NR1H2P55055 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NR1H2P55055 NXPH1-205ENST00000602349 1953 ntBASIC4.15□□□□□ -1.74
NR1H2P55055 RNA5SP307-201ENST00000362863 116 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 SNORA71.2-201ENST00000364941 134 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 Y_RNA.560-201ENST00000384689 102 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 Z98745.1-201ENST00000402553 494 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AL603766.1-201ENST00000407763 664 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 MIR320C1-201ENST00000408566 88 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.15□□□□□ -1.75
NR1H2P55055 RSU1P3-201ENST00000412878 835 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.15□□□□□ -1.75
NR1H2P55055 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.15□□□□□ -1.75
NR1H2P55055 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.15□□□□□ -1.75
NR1H2P55055 AC093698.1-201ENST00000423843 571 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.15□□□□□ -1.75
NR1H2P55055 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.15□□□□□ -1.75
NR1H2P55055 MTCO3P16-201ENST00000454456 754 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 MTND2P28-201ENST00000457540 1044 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AC090142.1-201ENST00000465776 462 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AC010285.1-201ENST00000470580 392 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 TMED11P-201ENST00000479478 690 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AC013356.1-201ENST00000489027 564 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
NR1H2P55055 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.15□□□□□ -1.75
NR1H2P55055 AC025554.1-201ENST00000505641 188 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NR1H2P55055 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.15□□□□□ -1.75
NR1H2P55055 AC093677.1-201ENST00000514414 678 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 RNU6-1095P-201ENST00000516148 108 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NR1H2P55055 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.15□□□□□ -1.75
NR1H2P55055 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.15□□□□□ -1.75
NR1H2P55055 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NR1H2P55055 AC135001.1-201ENST00000544546 283 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.15□□□□□ -1.75
NR1H2P55055 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.15□□□□□ -1.75
NR1H2P55055 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.15□□□□□ -1.75
NR1H2P55055 AC074050.1-201ENST00000563247 211 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AC012435.1-202ENST00000568772 240 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AC141257.3-201ENST00000572906 215 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 MIR1254-2-201ENST00000579553 63 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.15□□□□□ -1.75
NR1H2P55055 AC090186.1-201ENST00000605991 572 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AC080013.6-201ENST00000606185 215 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AC008785.1-201ENST00000624475 456 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 AC007494.3-201ENST00000624660 743 ntBASIC4.15□□□□□ -1.75
NR1H2P55055 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.15□□□□□ -1.75
NR1H2P55055 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.15□□□□□ -1.75
NR1H2P55055 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.15□□□□□ -1.75
NR1H2P55055 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NR1H2P55055 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
NR1H2P55055 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NR1H2P55055 AL442639.1-201ENST00000625030 1899 ntBASIC4.14□□□□□ -1.75
NR1H2P55055 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
NR1H2P55055 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms