Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
MSH6P52701 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
MSH6P52701 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MSH6P52701 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
MSH6P52701 RNU6-532P-201ENST00000384318 107 ntBASIC3.88□□□□□ -1.79
MSH6P52701 RNU6-482P-201ENST00000391068 107 ntBASIC3.88□□□□□ -1.79
MSH6P52701 RPL32P35-201ENST00000415214 394 ntBASIC3.88□□□□□ -1.79
MSH6P52701 AC009963.1-201ENST00000417265 157 ntBASIC3.88□□□□□ -1.79
MSH6P52701 MTCO3P21-201ENST00000430791 643 ntBASIC3.88□□□□□ -1.79
MSH6P52701 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.88□□□□□ -1.79
MSH6P52701 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MSH6P52701 RPL23AP15-201ENST00000450202 459 ntBASIC3.88□□□□□ -1.79
MSH6P52701 AC096725.1-201ENST00000514266 313 ntBASIC3.88□□□□□ -1.79
MSH6P52701 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.88□□□□□ -1.79
MSH6P52701 AC007954.1-201ENST00000554198 494 ntBASIC3.88□□□□□ -1.79
MSH6P52701 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.88□□□□□ -1.79
MSH6P52701 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.88□□□□□ -1.79
MSH6P52701 DNAJC19P3-201ENST00000594491 331 ntBASIC3.88□□□□□ -1.79
MSH6P52701 AC010200.2-201ENST00000605098 235 ntBASIC3.88□□□□□ -1.79
MSH6P52701 AL450489.1-201ENST00000612071 468 ntBASIC3.88□□□□□ -1.79
MSH6P52701 AC116447.1-201ENST00000613153 453 ntBASIC3.88□□□□□ -1.79
MSH6P52701 LINC00216-201ENST00000623548 1126 ntBASIC3.88□□□□□ -1.79
MSH6P52701 CTSLP2-204ENST00000629029 392 ntBASIC3.88□□□□□ -1.79
MSH6P52701 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.88□□□□□ -1.79
MSH6P52701 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MSH6P52701 AC022031.1-201ENST00000585985 2593 ntBASIC3.88□□□□□ -1.79
MSH6P52701 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MSH6P52701 AC114546.3-201ENST00000623582 1734 ntBASIC3.87□□□□□ -1.79
MSH6P52701 AC107081.3-201ENST00000612715 2034 ntBASIC3.87□□□□□ -1.79
MSH6P52701 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MSH6P52701 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MSH6P52701 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
MSH6P52701 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
MSH6P52701 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MSH6P52701 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.87□□□□□ -1.79
MSH6P52701 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.87□□□□□ -1.79
MSH6P52701 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.87□□□□□ -1.79
MSH6P52701 MTCYBP12-201ENST00000440559 1134 ntBASIC3.87□□□□□ -1.79
MSH6P52701 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.87□□□□□ -1.79
MSH6P52701 AP002345.1-201ENST00000456493 928 ntBASIC3.87□□□□□ -1.79
MSH6P52701 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.87□□□□□ -1.79
MSH6P52701 AC108120.2-201ENST00000512973 294 ntBASIC3.87□□□□□ -1.79
MSH6P52701 RNU6-760P-201ENST00000516078 97 ntBASIC3.87□□□□□ -1.79
MSH6P52701 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.87□□□□□ -1.79
MSH6P52701 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.87□□□□□ -1.79
MSH6P52701 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MSH6P52701 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.87□□□□□ -1.79
MSH6P52701 BX322635.1-201ENST00000605804 496 ntBASIC3.87□□□□□ -1.79
MSH6P52701 AC025754.2-201ENST00000606491 432 ntBASIC3.87□□□□□ -1.79
MSH6P52701 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.87□□□□□ -1.79
MSH6P52701 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MSH6P52701 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.87□□□□□ -1.79
MSH6P52701 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.86□□□□□ -1.79
MSH6P52701 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
MSH6P52701 RNU6-805P-201ENST00000365643 106 ntBASIC3.86□□□□□ -1.79
MSH6P52701 RNU6-31P-201ENST00000384388 108 ntBASIC3.86□□□□□ -1.79
MSH6P52701 RNU6-146P-201ENST00000384602 108 ntBASIC3.86□□□□□ -1.79
MSH6P52701 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.86□□□□□ -1.79
MSH6P52701 RPS15AP6-201ENST00000420703 385 ntBASIC3.86□□□□□ -1.79
MSH6P52701 NDUFA5P10-201ENST00000432147 357 ntBASIC3.86□□□□□ -1.79
MSH6P52701 ELOCP10-201ENST00000440624 327 ntBASIC3.86□□□□□ -1.79
MSH6P52701 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.86□□□□□ -1.79
MSH6P52701 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
MSH6P52701 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.86□□□□□ -1.79
MSH6P52701 SNORA70.14-201ENST00000516205 110 ntBASIC3.86□□□□□ -1.79
MSH6P52701 RNU6-347P-201ENST00000516658 105 ntBASIC3.86□□□□□ -1.79
MSH6P52701 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.86□□□□□ -1.79
MSH6P52701 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
MSH6P52701 AC015712.3-201ENST00000559380 164 ntBASIC3.86□□□□□ -1.79
MSH6P52701 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.86□□□□□ -1.79
MSH6P52701 AC123786.2-201ENST00000603459 275 ntBASIC3.86□□□□□ -1.79
MSH6P52701 ELOCP34-201ENST00000604436 327 ntBASIC3.86□□□□□ -1.79
MSH6P52701 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.86□□□□□ -1.79
MSH6P52701 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.86□□□□□ -1.79
MSH6P52701 AL356490.1-201ENST00000623079 479 ntBASIC3.86□□□□□ -1.79
MSH6P52701 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
MSH6P52701 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
MSH6P52701 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.85□□□□□ -1.79
MSH6P52701 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.85□□□□□ -1.79
MSH6P52701 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.85□□□□□ -1.79
MSH6P52701 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.85□□□□□ -1.79
MSH6P52701 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
MSH6P52701 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
MSH6P52701 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
MSH6P52701 U3.6-201ENST00000363622 211 ntBASIC3.85□□□□□ -1.79
MSH6P52701 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
MSH6P52701 MIR320B1-201ENST00000390209 79 ntBASIC3.85□□□□□ -1.79
MSH6P52701 RPS20P25-201ENST00000412447 352 ntBASIC3.85□□□□□ -1.79
MSH6P52701 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
MSH6P52701 AL645939.1-201ENST00000453429 797 ntBASIC3.85□□□□□ -1.79
MSH6P52701 AP000893.1-201ENST00000474462 794 ntBASIC3.85□□□□□ -1.79
MSH6P52701 HMGB1P47-201ENST00000511281 589 ntBASIC3.85□□□□□ -1.79
MSH6P52701 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.85□□□□□ -1.79
MSH6P52701 RNU6-889P-201ENST00000517189 103 ntBASIC3.85□□□□□ -1.79
MSH6P52701 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.85□□□□□ -1.79
MSH6P52701 UBTFL10-201ENST00000528532 562 ntBASIC3.85□□□□□ -1.79
MSH6P52701 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.85□□□□□ -1.79
MSH6P52701 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.85□□□□□ -1.79
MSH6P52701 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.85□□□□□ -1.79
MSH6P52701 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms