Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RPL7P53-201ENST00000421245 739 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLCN3P51790 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLCN3P51790 AL365396.1-201ENST00000430854 671 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 UBE2D3P1-201ENST00000436669 444 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 ELOCP8-201ENST00000439309 332 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 ELOCP15-201ENST00000442090 332 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.15□□□□□ -1.75
CLCN3P51790 MTND1P29-201ENST00000448112 647 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CLCN3P51790 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCN3P51790 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.15□□□□□ -1.75
CLCN3P51790 RN7SKP277-201ENST00000516895 283 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 RN7SKP234-201ENST00000517173 224 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.15□□□□□ -1.75
CLCN3P51790 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.15□□□□□ -1.75
CLCN3P51790 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.15□□□□□ -1.75
CLCN3P51790 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.15□□□□□ -1.75
CLCN3P51790 OR4A45P-201ENST00000529954 901 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.15□□□□□ -1.75
CLCN3P51790 AC090502.2-201ENST00000549267 280 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 AC090877.1-201ENST00000561418 344 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCN3P51790 BNIP3P22-201ENST00000593399 556 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.15□□□□□ -1.75
CLCN3P51790 AC008739.3-201ENST00000603262 127 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 AC007566.2-201ENST00000603642 413 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 AL133507.1-201ENST00000605269 557 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 AP003117.2-201ENST00000606010 545 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCN3P51790 AC131235.4-201ENST00000609288 620 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 AC244100.1-202ENST00000621554 382 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CLCN3P51790 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLCN3P51790 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLCN3P51790 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLCN3P51790 AL513185.3-201ENST00000433335 1300 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 LINC02471-203ENST00000641941 4752 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLCN3P51790 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLCN3P51790 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCN3P51790 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCN3P51790 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCN3P51790 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC090229.1-201ENST00000590983 1609 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCN3P51790 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.14□□□□□ -1.75
CLCN3P51790 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCN3P51790 AC106871.1-201ENST00000568324 3102 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCN3P51790 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCN3P51790 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCN3P51790 SNORD74.4-201ENST00000364129 80 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCN3P51790 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCN3P51790 AC073264.1-201ENST00000411508 416 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCN3P51790 RPS12P5-201ENST00000423449 371 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 AC096638.2-201ENST00000434965 711 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 KATNBL1P3-201ENST00000443475 909 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC108941.1-201ENST00000502853 530 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCN3P51790 HMGB1P28-201ENST00000507778 552 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 MTCYBP37-201ENST00000510642 1133 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 OR5BM1P-201ENST00000512021 366 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCN3P51790 MTCO1P47-201ENST00000523889 1271 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCN3P51790 PDCD5P1-201ENST00000543528 309 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCN3P51790 CENPUP2-201ENST00000555897 1186 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCN3P51790 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.14□□□□□ -1.75
CLCN3P51790 AC010680.4-201ENST00000605334 543 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 AC012557.2-201ENST00000605919 418 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 AC116618.1-201ENST00000634617 774 ntBASIC4.14□□□□□ -1.75
CLCN3P51790 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCN3P51790 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CLCN3P51790 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CLCN3P51790 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCN3P51790 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCN3P51790 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCN3P51790 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CLCN3P51790 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.13□□□□□ -1.75
CLCN3P51790 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCN3P51790 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCN3P51790 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLCN3P51790 AL450338.1-201ENST00000407987 512 ntBASIC4.13□□□□□ -1.75
CLCN3P51790 RNA5SP306-201ENST00000411087 107 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms