Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RN7SKP227-201ENST00000364445 330 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD13P35453 Y_RNA.408-201ENST00000383987 102 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 SNORD51-201ENST00000384320 80 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 RNU1-89P-201ENST00000384592 164 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 MIR1193-201ENST00000408109 78 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD13P35453 RN7SKP263-201ENST00000411194 309 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 RAD23BP2-201ENST00000416003 1207 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 RPL7P53-201ENST00000421245 739 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 AL139421.1-201ENST00000423010 169 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD13P35453 PSMA6P3-201ENST00000428242 164 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD13P35453 COX7BP2-201ENST00000437976 242 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 HSPE1P28-201ENST00000443139 211 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD13P35453 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.12□□□□□ -1.75
HOXD13P35453 AC098824.1-201ENST00000453565 980 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 USP9YP25-201ENST00000457708 443 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 RN7SL93P-201ENST00000463035 293 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 MTCYBP17-201ENST00000503579 789 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 XKRY-201ENST00000510392 1100 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD13P35453 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD13P35453 RNU6-27P-201ENST00000516146 107 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD13P35453 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD13P35453 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD13P35453 AC053481.3-201ENST00000577881 843 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD13P35453 AC091925.2-201ENST00000625059 256 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD13P35453 MIR4278-201ENST00000636094 69 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD13P35453 AC097714.1-201ENST00000511272 1647 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD13P35453 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD13P35453 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD13P35453 AP002907.1-201ENST00000606361 1430 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXD13P35453 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD13P35453 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD13P35453 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD13P35453 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HOXD13P35453 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HOXD13P35453 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD13P35453 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD13P35453 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD13P35453 RNA5SP235-201ENST00000365411 114 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXD13P35453 RNU6-1242P-201ENST00000391052 103 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 HMGB1P17-201ENST00000403495 628 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 MTATP6P27-201ENST00000416987 621 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 ELOCP9-201ENST00000418624 239 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 RPL21P66-201ENST00000426566 466 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD13P35453 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXD13P35453 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.11□□□□□ -1.75
HOXD13P35453 ST13P14-201ENST00000474095 734 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HOXD13P35453 AC068587.1-201ENST00000483613 781 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 AC106872.2-201ENST00000494303 480 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 AC092045.1-201ENST00000495716 1231 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXD13P35453 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXD13P35453 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
HOXD13P35453 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD13P35453 NPM1P41-201ENST00000512920 831 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.11□□□□□ -1.75
HOXD13P35453 AC110760.3-202ENST00000515177 371 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 FABP5P12-201ENST00000515543 389 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 IGHV3-32-201ENST00000519182 355 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 AC022861.1-201ENST00000522981 663 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 OR5AK1P-201ENST00000524837 922 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 MED28P5-201ENST00000528254 438 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 AC092851.1-201ENST00000535964 478 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 RFPL1S-203ENST00000539579 330 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 AC008011.1-201ENST00000545989 227 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXD13P35453 AC141257.3-201ENST00000572906 215 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 AC244505.7-201ENST00000599675 272 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 AC006270.3-201ENST00000605967 1036 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 AL590282.1-201ENST00000610379 1136 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 AC018755.4-201ENST00000619715 454 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXD13P35453 AC004009.2-201ENST00000623016 728 ntBASIC4.11□□□□□ -1.75
HOXD13P35453 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
HOXD13P35453 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXD13P35453 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD13P35453 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD13P35453 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD13P35453 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HOXD13P35453 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
HOXD13P35453 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD13P35453 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD13P35453 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HOXD13P35453 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms