Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.02□□□□□ -2.09
CKS2P33552 AC007458.1-201ENST00000542812 373 ntBASIC2.02□□□□□ -2.09
CKS2P33552 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.02□□□□□ -2.09
CKS2P33552 AP001029.3-201ENST00000588063 596 ntBASIC2.02□□□□□ -2.09
CKS2P33552 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.02□□□□□ -2.09
CKS2P33552 AC113368.1-201ENST00000603736 382 ntBASIC2.02□□□□□ -2.09
CKS2P33552 AC008277.2-201ENST00000605196 797 ntBASIC2.02□□□□□ -2.09
CKS2P33552 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CKS2P33552 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.02□□□□□ -2.09
CKS2P33552 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.02□□□□□ -2.09
CKS2P33552 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.02□□□□□ -2.09
CKS2P33552 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CKS2P33552 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.01□□□□□ -2.09
CKS2P33552 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CKS2P33552 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CKS2P33552 MIR6073-201ENST00000352083 89 ntBASIC2.01□□□□□ -2.09
CKS2P33552 RNU1-33P-201ENST00000364249 162 ntBASIC2.01□□□□□ -2.09
CKS2P33552 SNORA71.1-201ENST00000364523 117 ntBASIC2.01□□□□□ -2.09
CKS2P33552 OR6K3-202ENST00000368146 996 ntBASIC2.01□□□□□ -2.09
CKS2P33552 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CKS2P33552 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CKS2P33552 FO393413.1-201ENST00000402892 195 ntBASIC2.01□□□□□ -2.09
CKS2P33552 AL356057.2-201ENST00000403318 432 ntBASIC2.01□□□□□ -2.09
CKS2P33552 RNA5SP181-201ENST00000410246 98 ntBASIC2.01□□□□□ -2.09
CKS2P33552 RAB9AP3-201ENST00000412737 573 ntBASIC2.01□□□□□ -2.09
CKS2P33552 CASKP1-201ENST00000412870 582 ntBASIC2.01□□□□□ -2.09
CKS2P33552 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.01□□□□□ -2.09
CKS2P33552 AC105402.1-201ENST00000413336 545 ntBASIC2.01□□□□□ -2.09
CKS2P33552 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.01□□□□□ -2.09
CKS2P33552 HMGN2P30-201ENST00000423237 256 ntBASIC2.01□□□□□ -2.09
CKS2P33552 DUTP6-201ENST00000425573 462 ntBASIC2.01□□□□□ -2.09
CKS2P33552 RSL24D1P6-201ENST00000426934 401 ntBASIC2.01□□□□□ -2.09
CKS2P33552 RPS20P5-201ENST00000434808 360 ntBASIC2.01□□□□□ -2.09
CKS2P33552 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.01□□□□□ -2.09
CKS2P33552 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC2.01□□□□□ -2.09
CKS2P33552 AC127537.2-201ENST00000439258 465 ntBASIC2.01□□□□□ -2.09
CKS2P33552 RAB9AP1-201ENST00000449393 573 ntBASIC2.01□□□□□ -2.09
CKS2P33552 AC027673.1-201ENST00000456245 405 ntBASIC2.01□□□□□ -2.09
CKS2P33552 RPS29P12-201ENST00000460178 152 ntBASIC2.01□□□□□ -2.09
CKS2P33552 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.01□□□□□ -2.09
CKS2P33552 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.01□□□□□ -2.09
CKS2P33552 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.01□□□□□ -2.09
CKS2P33552 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.01□□□□□ -2.09
CKS2P33552 SEM1P1-201ENST00000506694 209 ntBASIC2.01□□□□□ -2.09
CKS2P33552 AC008565.1-201ENST00000509046 885 ntBASIC2.01□□□□□ -2.09
CKS2P33552 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.01□□□□□ -2.09
CKS2P33552 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.01□□□□□ -2.09
CKS2P33552 SNORD116-30-201ENST00000516468 85 ntBASIC2.01□□□□□ -2.09
CKS2P33552 SNORA31.15-201ENST00000516771 132 ntBASIC2.01□□□□□ -2.09
CKS2P33552 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.01□□□□□ -2.09
CKS2P33552 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.01□□□□□ -2.09
CKS2P33552 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.01□□□□□ -2.09
CKS2P33552 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.01□□□□□ -2.09
CKS2P33552 OR7K1P-201ENST00000546439 926 ntBASIC2.01□□□□□ -2.09
CKS2P33552 NBEAP1-201ENST00000554452 979 ntBASIC2.01□□□□□ -2.09
CKS2P33552 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.01□□□□□ -2.09
CKS2P33552 AC012182.1-201ENST00000570133 895 ntBASIC2.01□□□□□ -2.09
CKS2P33552 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CKS2P33552 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
CKS2P33552 CYCSP41-201ENST00000616920 296 ntBASIC2.01□□□□□ -2.09
CKS2P33552 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CKS2P33552 AC079228.1-201ENST00000624774 1049 ntBASIC2.01□□□□□ -2.09
CKS2P33552 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.01□□□□□ -2.09
CKS2P33552 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.01□□□□□ -2.09
CKS2P33552 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CKS2P33552 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CKS2P33552 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2□□□□□ -2.09
CKS2P33552 RNU6-799P-201ENST00000363567 107 ntBASIC2□□□□□ -2.09
CKS2P33552 SNORA25.6-201ENST00000364121 118 ntBASIC2□□□□□ -2.09
CKS2P33552 RNA5-8SP4-201ENST00000365096 150 ntBASIC2□□□□□ -2.09
CKS2P33552 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2□□□□□ -2.09
CKS2P33552 RNU6-1027P-201ENST00000383998 107 ntBASIC2□□□□□ -2.09
CKS2P33552 TANK-203ENST00000402568 878 ntTSL 5 BASIC2□□□□□ -2.09
CKS2P33552 UQCRFS1P3-201ENST00000407697 385 ntBASIC2□□□□□ -2.09
CKS2P33552 RN7SKP220-201ENST00000410611 288 ntBASIC2□□□□□ -2.09
CKS2P33552 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2□□□□□ -2.09
CKS2P33552 NIPA2P1-201ENST00000426223 976 ntBASIC2□□□□□ -2.09
CKS2P33552 C4BPAP2-201ENST00000428434 478 ntBASIC2□□□□□ -2.09
CKS2P33552 AC022018.1-201ENST00000430685 241 ntBASIC2□□□□□ -2.09
CKS2P33552 SNRPEP4-201ENST00000435815 279 ntBASIC2□□□□□ -2.09
CKS2P33552 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2□□□□□ -2.09
CKS2P33552 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2□□□□□ -2.09
CKS2P33552 AC023512.1-201ENST00000444513 499 ntBASIC2□□□□□ -2.09
CKS2P33552 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2□□□□□ -2.09
CKS2P33552 snoU13.3-201ENST00000459441 104 ntBASIC2□□□□□ -2.09
CKS2P33552 RPS23P3-201ENST00000470993 430 ntBASIC2□□□□□ -2.09
CKS2P33552 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2□□□□□ -2.09
CKS2P33552 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2□□□□□ -2.09
CKS2P33552 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2□□□□□ -2.09
CKS2P33552 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2□□□□□ -2.09
CKS2P33552 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2□□□□□ -2.09
CKS2P33552 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2□□□□□ -2.09
CKS2P33552 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2□□□□□ -2.09
CKS2P33552 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2□□□□□ -2.09
CKS2P33552 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2□□□□□ -2.09
CKS2P33552 COX6CP3-201ENST00000580869 223 ntBASIC2□□□□□ -2.09
CKS2P33552 MIR3922-201ENST00000585192 84 ntBASIC2□□□□□ -2.09
CKS2P33552 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2□□□□□ -2.09
CKS2P33552 AF230666.2-201ENST00000602328 725 ntBASIC2□□□□□ -2.09
CKS2P33552 AL133507.1-201ENST00000605269 557 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms