Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 UBE2FP1-201ENST00000416536 447 ntBASIC4.55□□□□□ -1.68
CD40P25942 BEND7P1-201ENST00000422058 457 ntBASIC4.55□□□□□ -1.68
CD40P25942 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.55□□□□□ -1.68
CD40P25942 OR2AS1P-201ENST00000427827 319 ntBASIC4.55□□□□□ -1.68
CD40P25942 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.55□□□□□ -1.68
CD40P25942 AC138761.5-201ENST00000433967 325 ntBASIC4.55□□□□□ -1.68
CD40P25942 MTATP6P16-201ENST00000434543 526 ntBASIC4.55□□□□□ -1.68
CD40P25942 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD40P25942 AC073850.1-201ENST00000449243 255 ntBASIC4.55□□□□□ -1.68
CD40P25942 AC005008.1-201ENST00000456151 612 ntBASIC4.55□□□□□ -1.68
CD40P25942 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.55□□□□□ -1.68
CD40P25942 RPL5P22-201ENST00000480199 884 ntBASIC4.55□□□□□ -1.68
CD40P25942 AC093270.2-201ENST00000486157 792 ntBASIC4.55□□□□□ -1.68
CD40P25942 RPL39P36-201ENST00000490784 156 ntBASIC4.55□□□□□ -1.68
CD40P25942 AC022133.1-201ENST00000490961 571 ntBASIC4.55□□□□□ -1.68
CD40P25942 RPS15AP36-201ENST00000492022 382 ntBASIC4.55□□□□□ -1.68
CD40P25942 RPS24P16-201ENST00000497294 392 ntBASIC4.55□□□□□ -1.68
CD40P25942 NDUFA5P12-201ENST00000503796 343 ntBASIC4.55□□□□□ -1.68
CD40P25942 AC139783.2-201ENST00000504847 1145 ntBASIC4.55□□□□□ -1.68
CD40P25942 HMGN1P9-201ENST00000515212 298 ntBASIC4.55□□□□□ -1.68
CD40P25942 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.55□□□□□ -1.68
CD40P25942 AC022360.1-201ENST00000521058 340 ntBASIC4.55□□□□□ -1.68
CD40P25942 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.55□□□□□ -1.68
CD40P25942 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.55□□□□□ -1.68
CD40P25942 OR4R3P-201ENST00000525084 838 ntBASIC4.55□□□□□ -1.68
CD40P25942 AC092490.3-201ENST00000545370 572 ntBASIC4.55□□□□□ -1.68
CD40P25942 AC126177.3-201ENST00000551839 688 ntBASIC4.55□□□□□ -1.68
CD40P25942 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.55□□□□□ -1.68
CD40P25942 AC011447.4-201ENST00000587562 111 ntBASIC4.55□□□□□ -1.68
CD40P25942 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.55□□□□□ -1.68
CD40P25942 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.55□□□□□ -1.68
CD40P25942 AC233309.1-201ENST00000619522 751 ntBASIC4.55□□□□□ -1.68
CD40P25942 MIR6730-201ENST00000622213 67 ntBASIC4.55□□□□□ -1.68
CD40P25942 AP002799.1-201ENST00000623552 423 ntBASIC4.55□□□□□ -1.68
CD40P25942 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.55□□□□□ -1.68
CD40P25942 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.55□□□□□ -1.68
CD40P25942 AC135068.12-201ENST00000637370 931 ntBASIC4.55□□□□□ -1.68
CD40P25942 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD40P25942 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CD40P25942 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD40P25942 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.55□□□□□ -1.68
CD40P25942 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CD40P25942 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CD40P25942 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD40P25942 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CD40P25942 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD40P25942 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
CD40P25942 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD40P25942 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD40P25942 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD40P25942 FAM91A3P-201ENST00000456826 2544 ntBASIC4.54□□□□□ -1.68
CD40P25942 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CD40P25942 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CD40P25942 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CD40P25942 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD40P25942 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CD40P25942 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.54□□□□□ -1.68
CD40P25942 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CD40P25942 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.54□□□□□ -1.68
CD40P25942 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CD40P25942 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD40P25942 AC244517.1-201ENST00000606030 2086 ntBASIC4.54□□□□□ -1.68
CD40P25942 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CD40P25942 RPL7P26-201ENST00000333817 754 ntBASIC4.54□□□□□ -1.68
CD40P25942 U3.3-201ENST00000362986 216 ntBASIC4.54□□□□□ -1.68
CD40P25942 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD40P25942 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CD40P25942 RNU6-837P-201ENST00000391056 108 ntBASIC4.54□□□□□ -1.68
CD40P25942 RNU6-754P-201ENST00000391166 107 ntBASIC4.54□□□□□ -1.68
CD40P25942 AL109755.1-201ENST00000401791 649 ntBASIC4.54□□□□□ -1.68
CD40P25942 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40P25942 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40P25942 AC245054.1-201ENST00000420944 258 ntBASIC4.54□□□□□ -1.68
CD40P25942 MTCYBP8-201ENST00000422855 651 ntBASIC4.54□□□□□ -1.68
CD40P25942 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.54□□□□□ -1.68
CD40P25942 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40P25942 RPS27P18-201ENST00000431701 247 ntBASIC4.54□□□□□ -1.68
CD40P25942 RPS29P10-201ENST00000439197 166 ntBASIC4.54□□□□□ -1.68
CD40P25942 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40P25942 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40P25942 MTND1P11-201ENST00000456661 876 ntBASIC4.54□□□□□ -1.68
CD40P25942 RN7SL197P-201ENST00000466981 299 ntBASIC4.54□□□□□ -1.68
CD40P25942 AC007537.2-201ENST00000472093 511 ntBASIC4.54□□□□□ -1.68
CD40P25942 BX284632.1-201ENST00000478218 541 ntBASIC4.54□□□□□ -1.68
CD40P25942 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40P25942 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40P25942 NDUFB5P1-201ENST00000508134 564 ntBASIC4.54□□□□□ -1.68
CD40P25942 AC026801.2-201ENST00000515352 425 ntBASIC4.54□□□□□ -1.68
CD40P25942 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40P25942 RNU6-1095P-201ENST00000516148 108 ntBASIC4.54□□□□□ -1.68
CD40P25942 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.54□□□□□ -1.68
CD40P25942 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40P25942 AC103843.2-201ENST00000530523 682 ntBASIC4.54□□□□□ -1.68
CD40P25942 RAB11AP2-201ENST00000545905 639 ntBASIC4.54□□□□□ -1.68
CD40P25942 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.54□□□□□ -1.68
CD40P25942 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.54□□□□□ -1.68
CD40P25942 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.54□□□□□ -1.68
CD40P25942 RN7SL708P-201ENST00000580952 299 ntBASIC4.54□□□□□ -1.68
CD40P25942 MIR4293-201ENST00000584305 78 ntBASIC4.54□□□□□ -1.68
CD40P25942 MIR7853-201ENST00000584820 132 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms