Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC103591.3-201ENST00000608684 209 ntBASIC4.22□□□□□ -1.73
TNFSF4P23510 AP000254.1-201ENST00000609934 520 ntBASIC4.22□□□□□ -1.73
TNFSF4P23510 AC093838.1-201ENST00000613014 469 ntBASIC4.22□□□□□ -1.73
TNFSF4P23510 AL627230.1-201ENST00000613077 211 ntBASIC4.22□□□□□ -1.73
TNFSF4P23510 AL591926.8-201ENST00000616876 211 ntBASIC4.22□□□□□ -1.73
TNFSF4P23510 BX005214.3-202ENST00000619809 325 ntBASIC4.22□□□□□ -1.73
TNFSF4P23510 AC243312.2-201ENST00000623340 601 ntBASIC4.22□□□□□ -1.73
TNFSF4P23510 AC019226.1-201ENST00000625666 515 ntBASIC4.22□□□□□ -1.73
TNFSF4P23510 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
TNFSF4P23510 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.22□□□□□ -1.73
TNFSF4P23510 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFSF4P23510 DDX10P1-201ENST00000448545 1933 ntBASIC4.22□□□□□ -1.73
TNFSF4P23510 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.22□□□□□ -1.73
TNFSF4P23510 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFSF4P23510 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFSF4P23510 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TNFSF4P23510 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TNFSF4P23510 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TNFSF4P23510 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TNFSF4P23510 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TNFSF4P23510 RNU6-600P-201ENST00000362524 99 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 RNA5SP123-201ENST00000363244 119 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 Y_RNA.359-201ENST00000365498 102 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.21□□□□□ -1.74
TNFSF4P23510 RNU6-348P-201ENST00000384386 107 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AC097374.1-203ENST00000400783 485 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF4P23510 RPL7AP73-201ENST00000413490 353 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 COX6B1P1-201ENST00000415962 213 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TNFSF4P23510 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.21□□□□□ -1.74
TNFSF4P23510 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.21□□□□□ -1.74
TNFSF4P23510 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF4P23510 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF4P23510 AC112498.1-201ENST00000444401 332 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF4P23510 AL691482.1-201ENST00000453255 87 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 TMED11P-201ENST00000479478 690 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AC073073.1-201ENST00000493920 463 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AC114967.1-201ENST00000504890 259 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 VN1R104P-201ENST00000505115 1009 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 NDUFB4P2-201ENST00000509515 391 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 Y_RNA.672-201ENST00000516289 104 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 OR5D17P-201ENST00000531492 978 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF4P23510 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF4P23510 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF4P23510 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF4P23510 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFSF4P23510 AC012213.3-201ENST00000577199 777 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 MIR3146-201ENST00000580367 79 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 HMGN1P30-201ENST00000589286 268 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AC087683.1-201ENST00000591187 441 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 VN1R79P-201ENST00000593540 513 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 KC877982.1-201ENST00000602313 470 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AL034351.1-201ENST00000605288 668 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AC012443.1-201ENST00000605605 231 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.21□□□□□ -1.74
TNFSF4P23510 AL139286.2-201ENST00000606838 396 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AC103710.1-201ENST00000610003 901 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AL450472.3-201ENST00000615578 367 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AL603758.1-201ENST00000618654 241 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AL713922.2-201ENST00000619384 716 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AC022106.2-201ENST00000620114 757 ntBASIC4.21□□□□□ -1.74
TNFSF4P23510 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
TNFSF4P23510 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.21□□□□□ -1.74
TNFSF4P23510 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.21□□□□□ -1.74
TNFSF4P23510 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TNFSF4P23510 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
TNFSF4P23510 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
TNFSF4P23510 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TNFSF4P23510 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TNFSF4P23510 AC126323.6-202ENST00000568092 3511 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 FARSBP1-201ENST00000435808 1778 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TNFSF4P23510 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
TNFSF4P23510 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
TNFSF4P23510 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.2□□□□□ -1.74
TNFSF4P23510 RNU6-278P-201ENST00000390945 109 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 U3.32-201ENST00000408116 212 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 RN7SKP125-201ENST00000410481 302 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 RNU2-16P-201ENST00000410712 136 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.2□□□□□ -1.74
TNFSF4P23510 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.2□□□□□ -1.74
TNFSF4P23510 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.2□□□□□ -1.74
TNFSF4P23510 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TNFSF4P23510 RPL23AP38-201ENST00000423801 469 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 AC079780.1-201ENST00000428259 207 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.2□□□□□ -1.74
TNFSF4P23510 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.2□□□□□ -1.74
TNFSF4P23510 AC090774.1-201ENST00000435925 246 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 RPL35AP21-201ENST00000437667 333 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 AC073614.1-201ENST00000438690 650 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 AL138799.3-201ENST00000438968 350 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.2□□□□□ -1.74
TNFSF4P23510 RPL12P3-201ENST00000440080 396 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 RABEPKP1-201ENST00000440529 1026 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 AL450023.3-201ENST00000440592 271 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 AC244505.5-201ENST00000443639 207 ntBASIC4.2□□□□□ -1.74
TNFSF4P23510 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms