Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFX1P22670 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
RFX1P22670 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX1P22670 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX1P22670 GABPAP-201ENST00000419271 1356 ntBASIC6.2□□□□□ -1.42
RFX1P22670 MTND4P27-201ENST00000450813 1354 ntBASIC6.2□□□□□ -1.42
RFX1P22670 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.2□□□□□ -1.42
RFX1P22670 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX1P22670 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
RFX1P22670 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RFX1P22670 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.2□□□□□ -1.42
RFX1P22670 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RFX1P22670 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
RFX1P22670 MTCO1P24-201ENST00000515438 1558 ntBASIC6.2□□□□□ -1.42
RFX1P22670 Y_RNA.259-201ENST00000364619 101 ntBASIC6.2□□□□□ -1.42
RFX1P22670 MIR130A-201ENST00000385274 89 ntBASIC6.2□□□□□ -1.42
RFX1P22670 BEND7P1-201ENST00000422058 457 ntBASIC6.2□□□□□ -1.42
RFX1P22670 AC005517.2-201ENST00000424673 553 ntBASIC6.2□□□□□ -1.42
RFX1P22670 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.2□□□□□ -1.42
RFX1P22670 PTMAP6-201ENST00000439110 327 ntBASIC6.2□□□□□ -1.42
RFX1P22670 RPL23AP33-201ENST00000442301 452 ntBASIC6.2□□□□□ -1.42
RFX1P22670 AC093166.4-201ENST00000457867 318 ntBASIC6.2□□□□□ -1.42
RFX1P22670 RNU6-1208P-201ENST00000459588 107 ntBASIC6.2□□□□□ -1.42
RFX1P22670 RPS17P15-201ENST00000475609 349 ntBASIC6.2□□□□□ -1.42
RFX1P22670 RN7SL570P-201ENST00000484405 292 ntBASIC6.2□□□□□ -1.42
RFX1P22670 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.2□□□□□ -1.42
RFX1P22670 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.2□□□□□ -1.42
RFX1P22670 RNU6-864P-201ENST00000516256 108 ntBASIC6.2□□□□□ -1.42
RFX1P22670 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.2□□□□□ -1.42
RFX1P22670 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC6.2□□□□□ -1.42
RFX1P22670 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.2□□□□□ -1.42
RFX1P22670 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.2□□□□□ -1.42
RFX1P22670 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.2□□□□□ -1.42
RFX1P22670 AC103710.3-201ENST00000608157 948 ntBASIC6.2□□□□□ -1.42
RFX1P22670 SNHG22-203ENST00000617833 660 ntBASIC6.2□□□□□ -1.42
RFX1P22670 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RFX1P22670 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.2□□□□□ -1.42
RFX1P22670 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.2□□□□□ -1.42
RFX1P22670 AC134503.1-201ENST00000633048 54 ntBASIC6.2□□□□□ -1.42
RFX1P22670 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFX1P22670 AC114774.1-201ENST00000507410 1770 ntBASIC6.2□□□□□ -1.42
RFX1P22670 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX1P22670 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX1P22670 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFX1P22670 AC026951.1-201ENST00000559530 2459 ntBASIC6.2□□□□□ -1.42
RFX1P22670 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.2□□□□□ -1.42
RFX1P22670 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFX1P22670 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFX1P22670 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RFX1P22670 AC138907.8-201ENST00000623981 2256 ntBASIC6.19□□□□□ -1.42
RFX1P22670 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.19□□□□□ -1.42
RFX1P22670 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFX1P22670 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFX1P22670 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.19□□□□□ -1.42
RFX1P22670 RNA5SP500-201ENST00000364486 119 ntBASIC6.19□□□□□ -1.42
RFX1P22670 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RFX1P22670 Y_RNA.414-201ENST00000384011 101 ntBASIC6.19□□□□□ -1.42
RFX1P22670 SNORA24.1-201ENST00000384401 135 ntBASIC6.19□□□□□ -1.42
RFX1P22670 Y_RNA.493-201ENST00000384422 102 ntBASIC6.19□□□□□ -1.42
RFX1P22670 SNORA70E-201ENST00000384492 135 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AC013442.1-201ENST00000397347 228 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AL592114.1-201ENST00000403842 483 ntBASIC6.19□□□□□ -1.42
RFX1P22670 OR4K12P-201ENST00000406538 961 ntBASIC6.19□□□□□ -1.42
RFX1P22670 RN7SKP216-201ENST00000411050 312 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AL354890.1-201ENST00000413730 346 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AC093155.2-201ENST00000420734 937 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.19□□□□□ -1.42
RFX1P22670 RPL7L1P10-201ENST00000427790 463 ntBASIC6.19□□□□□ -1.42
RFX1P22670 KCTD9P3-201ENST00000434597 1169 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AL162395.1-201ENST00000457882 422 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.19□□□□□ -1.42
RFX1P22670 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.19□□□□□ -1.42
RFX1P22670 Y_RNA.654-201ENST00000497848 106 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AL161713.1-201ENST00000555538 145 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AL049872.1-201ENST00000556323 322 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.19□□□□□ -1.42
RFX1P22670 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.19□□□□□ -1.42
RFX1P22670 AL670379.6-201ENST00000603753 252 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AL670379.11-201ENST00000604059 253 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AC008162.1-201ENST00000604718 254 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AL670379.1-201ENST00000604752 252 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AL592436.1-201ENST00000605135 558 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AL670379.5-201ENST00000605253 252 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AL670379.12-201ENST00000605291 253 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AL670379.8-201ENST00000605353 252 ntBASIC6.19□□□□□ -1.42
RFX1P22670 AL670379.7-201ENST00000605823 252 ntBASIC6.19□□□□□ -1.42
RFX1P22670 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.19□□□□□ -1.42
RFX1P22670 uc_338.15-201ENST00000615470 191 ntBASIC6.19□□□□□ -1.42
RFX1P22670 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFX1P22670 AC090971.5-201ENST00000621102 293 ntBASIC6.19□□□□□ -1.42
RFX1P22670 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.19□□□□□ -1.42
RFX1P22670 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
RFX1P22670 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFX1P22670 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.19□□□□□ -1.42
RFX1P22670 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFX1P22670 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX1P22670 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.18□□□□□ -1.42
RFX1P22670 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RFX1P22670 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX1P22670 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms