Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.42□□□□□ -1.86
XRCC1P18887 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.42□□□□□ -1.86
XRCC1P18887 RN7SL339P-201ENST00000580597 296 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 AC005412.1-201ENST00000580812 1049 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 AC005014.3-201ENST00000605985 190 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 MIR8058-201ENST00000615737 89 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.42□□□□□ -1.86
XRCC1P18887 U4.6-201ENST00000621618 127 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
XRCC1P18887 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
XRCC1P18887 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
XRCC1P18887 AC111188.2-201ENST00000529697 1387 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 FRG1CP-201ENST00000358464 769 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 MIR208A-201ENST00000362287 71 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 SNORA70.4-201ENST00000365509 134 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
XRCC1P18887 RNU6-1226P-201ENST00000384317 107 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 MIR490-201ENST00000384865 128 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 EI24P2-201ENST00000397776 1076 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.41□□□□□ -1.86
XRCC1P18887 RNU6-575P-201ENST00000411326 105 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 AC027644.1-201ENST00000419595 298 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 MTCYBP24-201ENST00000420387 1106 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 AC005517.2-201ENST00000424673 553 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.41□□□□□ -1.86
XRCC1P18887 AC011242.1-201ENST00000433596 1158 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.41□□□□□ -1.86
XRCC1P18887 RPL12P26-201ENST00000452430 487 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.41□□□□□ -1.86
XRCC1P18887 AC021205.2-201ENST00000480069 347 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 HMGB1P38-201ENST00000490557 577 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 RPL5P23-201ENST00000496040 868 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 AC011352.3-201ENST00000505162 593 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
XRCC1P18887 AC008837.1-201ENST00000511513 412 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.41□□□□□ -1.86
XRCC1P18887 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.41□□□□□ -1.86
XRCC1P18887 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.41□□□□□ -1.86
XRCC1P18887 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.41□□□□□ -1.86
XRCC1P18887 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.41□□□□□ -1.86
XRCC1P18887 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.41□□□□□ -1.86
XRCC1P18887 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
XRCC1P18887 DUXAP6-201ENST00000553858 601 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.41□□□□□ -1.86
XRCC1P18887 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.41□□□□□ -1.86
XRCC1P18887 OR4G1P-201ENST00000588632 938 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.41□□□□□ -1.86
XRCC1P18887 SRGNP1-201ENST00000603392 451 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.41□□□□□ -1.86
XRCC1P18887 AL450489.1-201ENST00000612071 468 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 U73479.1-201ENST00000618062 168 ntBASIC3.41□□□□□ -1.86
XRCC1P18887 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.41□□□□□ -1.86
XRCC1P18887 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
XRCC1P18887 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
XRCC1P18887 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
XRCC1P18887 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
XRCC1P18887 ANKRD36P1-201ENST00000344424 659 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 RNU4-35P-201ENST00000362588 141 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 SNORD17-201ENST00000390930 237 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.4□□□□□ -1.87
XRCC1P18887 AL139098.1-201ENST00000407291 389 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.4□□□□□ -1.87
XRCC1P18887 AC096533.1-201ENST00000411645 353 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.4□□□□□ -1.87
XRCC1P18887 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.4□□□□□ -1.87
XRCC1P18887 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.4□□□□□ -1.87
XRCC1P18887 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.4□□□□□ -1.87
XRCC1P18887 GTF2IP23-201ENST00000423746 351 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.4□□□□□ -1.87
XRCC1P18887 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.4□□□□□ -1.87
XRCC1P18887 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.4□□□□□ -1.87
XRCC1P18887 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.4□□□□□ -1.87
XRCC1P18887 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.4□□□□□ -1.87
XRCC1P18887 AC244505.3-201ENST00000454598 187 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AC025518.1-201ENST00000479856 347 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AP000563.1-201ENST00000490865 758 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.4□□□□□ -1.87
XRCC1P18887 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.4□□□□□ -1.87
XRCC1P18887 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.4□□□□□ -1.87
XRCC1P18887 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
XRCC1P18887 AC074250.1-201ENST00000511117 192 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.4□□□□□ -1.87
XRCC1P18887 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.4□□□□□ -1.87
XRCC1P18887 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.4□□□□□ -1.87
XRCC1P18887 OR4A45P-201ENST00000529954 901 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AP004242.1-201ENST00000533701 349 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AC006518.1-201ENST00000541449 943 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AC092470.1-201ENST00000546187 132 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.4□□□□□ -1.87
XRCC1P18887 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
XRCC1P18887 AC090330.1-201ENST00000588646 764 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 HSPE1P14-201ENST00000605812 302 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AC098679.5-201ENST00000624394 571 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AL512506.2-201ENST00000624472 458 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.4□□□□□ -1.87
XRCC1P18887 AC004972.1-201ENST00000623934 2209 ntBASIC3.4□□□□□ -1.87
XRCC1P18887 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
XRCC1P18887 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms