Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFRAP16234 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.87□□□□□ -1.79
PDGFRAP16234 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.87□□□□□ -1.79
PDGFRAP16234 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.87□□□□□ -1.79
PDGFRAP16234 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.87□□□□□ -1.79
PDGFRAP16234 SNRPGP15-201ENST00000600149 222 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 RPP40P2-201ENST00000603596 712 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.87□□□□□ -1.79
PDGFRAP16234 AL391497.1-201ENST00000608671 547 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 OR4G3P-201ENST00000633500 913 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 FAM35DP-201ENST00000323387 2712 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFRAP16234 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.87□□□□□ -1.79
PDGFRAP16234 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PDGFRAP16234 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFRAP16234 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.87□□□□□ -1.79
PDGFRAP16234 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.87□□□□□ -1.79
PDGFRAP16234 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFRAP16234 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFRAP16234 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.86□□□□□ -1.79
PDGFRAP16234 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFRAP16234 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFRAP16234 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.86□□□□□ -1.79
PDGFRAP16234 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PDGFRAP16234 RNU6-263P-201ENST00000363811 107 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 RNU6-335P-201ENST00000364563 113 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.86□□□□□ -1.79
PDGFRAP16234 PTMAP2-201ENST00000397627 327 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 RPL7P60-201ENST00000397636 735 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 RPL31P1-201ENST00000398116 372 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 RNU2-42P-201ENST00000410697 113 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 MTCO2P8-201ENST00000412213 658 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AL161449.1-201ENST00000414531 1199 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 AL513174.1-201ENST00000423182 629 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 MTCO2P23-201ENST00000425216 680 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 GOT2P5-201ENST00000433995 546 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 AC099563.1-201ENST00000456086 418 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFRAP16234 RPL31P13-201ENST00000484151 370 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.86□□□□□ -1.79
PDGFRAP16234 RN7SKP31-201ENST00000516354 278 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFRAP16234 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AC006518.1-201ENST00000541449 943 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AC015688.2-201ENST00000584523 262 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AC245884.10-201ENST00000597355 337 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 AL159169.3-201ENST00000608871 561 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AL157392.4-201ENST00000609756 345 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 MIR8058-201ENST00000615737 89 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AC022960.3-201ENST00000619794 441 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AC012442.3-202ENST00000636742 206 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PDGFRAP16234 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.86□□□□□ -1.79
PDGFRAP16234 AP000553.6-201ENST00000641242 118 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.86□□□□□ -1.79
PDGFRAP16234 GDI2P1-201ENST00000429312 1336 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 AC107982.1-201ENST00000507171 1300 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PDGFRAP16234 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.86□□□□□ -1.79
PDGFRAP16234 MTND4P10-201ENST00000446199 1363 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 ZNF285B-201ENST00000561698 1767 ntBASIC3.86□□□□□ -1.79
PDGFRAP16234 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFRAP16234 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.85□□□□□ -1.79
PDGFRAP16234 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFRAP16234 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFRAP16234 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFRAP16234 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFRAP16234 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFRAP16234 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PDGFRAP16234 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFRAP16234 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFRAP16234 RNU6-989P-201ENST00000362756 107 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 SNORD82-201ENST00000365530 70 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFRAP16234 AC007066.1-201ENST00000392902 381 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 AC016769.3-201ENST00000396562 315 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 ARF4P3-201ENST00000397387 509 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 AL583834.1-201ENST00000406943 343 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 RPS3AP37-201ENST00000419176 745 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 MRPS18BP2-201ENST00000434310 759 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 SKP1P1-201ENST00000438081 489 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.85□□□□□ -1.79
PDGFRAP16234 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFRAP16234 AL136097.1-201ENST00000456945 913 ntBASIC3.85□□□□□ -1.79
PDGFRAP16234 PLGLA-201ENST00000465668 449 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms