Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 Z74021.1-201ENST00000423610 407 ntBASIC4.54□□□□□ -1.68
RHOP08100 AL356583.2-201ENST00000426536 280 ntBASIC4.54□□□□□ -1.68
RHOP08100 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RHOP08100 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.54□□□□□ -1.68
RHOP08100 RPL21P91-201ENST00000429231 479 ntBASIC4.54□□□□□ -1.68
RHOP08100 MTND1P2-201ENST00000430604 821 ntBASIC4.54□□□□□ -1.68
RHOP08100 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.54□□□□□ -1.68
RHOP08100 AC109583.1-201ENST00000432156 268 ntBASIC4.54□□□□□ -1.68
RHOP08100 RPL37P1-201ENST00000432310 284 ntBASIC4.54□□□□□ -1.68
RHOP08100 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.54□□□□□ -1.68
RHOP08100 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.54□□□□□ -1.68
RHOP08100 SNRPEP7-201ENST00000438350 220 ntBASIC4.54□□□□□ -1.68
RHOP08100 AL512326.1-201ENST00000443050 721 ntBASIC4.54□□□□□ -1.68
RHOP08100 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RHOP08100 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.54□□□□□ -1.68
RHOP08100 MTCO1P27-201ENST00000448269 226 ntBASIC4.54□□□□□ -1.68
RHOP08100 snoU109.1-201ENST00000459339 135 ntBASIC4.54□□□□□ -1.68
RHOP08100 APOOP2-201ENST00000461561 539 ntBASIC4.54□□□□□ -1.68
RHOP08100 RPL9P6-201ENST00000492764 598 ntBASIC4.54□□□□□ -1.68
RHOP08100 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.54□□□□□ -1.68
RHOP08100 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.54□□□□□ -1.68
RHOP08100 POU5F1P7-201ENST00000508759 541 ntBASIC4.54□□□□□ -1.68
RHOP08100 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.54□□□□□ -1.68
RHOP08100 AC108064.1-201ENST00000513791 460 ntBASIC4.54□□□□□ -1.68
RHOP08100 AC022483.1-201ENST00000514020 567 ntBASIC4.54□□□□□ -1.68
RHOP08100 RNU6-150P-201ENST00000516237 95 ntBASIC4.54□□□□□ -1.68
RHOP08100 RNA5SP519-201ENST00000516480 119 ntBASIC4.54□□□□□ -1.68
RHOP08100 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.54□□□□□ -1.68
RHOP08100 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.54□□□□□ -1.68
RHOP08100 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.54□□□□□ -1.68
RHOP08100 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.54□□□□□ -1.68
RHOP08100 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.54□□□□□ -1.68
RHOP08100 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.54□□□□□ -1.68
RHOP08100 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.54□□□□□ -1.68
RHOP08100 SNORA59B-202ENST00000578183 701 ntBASIC4.54□□□□□ -1.68
RHOP08100 AC022916.3-201ENST00000592961 742 ntBASIC4.54□□□□□ -1.68
RHOP08100 AL354984.3-201ENST00000604803 325 ntBASIC4.54□□□□□ -1.68
RHOP08100 AC008966.2-201ENST00000606157 453 ntBASIC4.54□□□□□ -1.68
RHOP08100 MIR6867-201ENST00000610636 67 ntBASIC4.54□□□□□ -1.68
RHOP08100 AC091304.9-201ENST00000612091 226 ntBASIC4.54□□□□□ -1.68
RHOP08100 AC078899.5-201ENST00000612475 178 ntBASIC4.54□□□□□ -1.68
RHOP08100 AL021997.2-201ENST00000615674 271 ntBASIC4.54□□□□□ -1.68
RHOP08100 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.54□□□□□ -1.68
RHOP08100 AL445363.3-201ENST00000623080 671 ntBASIC4.54□□□□□ -1.68
RHOP08100 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.54□□□□□ -1.68
RHOP08100 AC006378.2-201ENST00000623178 2476 ntBASIC4.54□□□□□ -1.68
RHOP08100 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RHOP08100 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.54□□□□□ -1.68
RHOP08100 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHOP08100 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.54□□□□□ -1.68
RHOP08100 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.54□□□□□ -1.68
RHOP08100 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.54□□□□□ -1.68
RHOP08100 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHOP08100 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHOP08100 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.53□□□□□ -1.68
RHOP08100 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.53□□□□□ -1.68
RHOP08100 DDX18P3-201ENST00000404856 2007 ntBASIC4.53□□□□□ -1.68
RHOP08100 AC107081.3-201ENST00000612715 2034 ntBASIC4.53□□□□□ -1.68
RHOP08100 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHOP08100 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.53□□□□□ -1.68
RHOP08100 MAPK10-304ENST00000641341 3984 ntBASIC4.53□□□□□ -1.68
RHOP08100 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.53□□□□□ -1.68
RHOP08100 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RHOP08100 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RHOP08100 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.53□□□□□ -1.68
RHOP08100 RNA5SP175-201ENST00000364275 119 ntBASIC4.53□□□□□ -1.68
RHOP08100 RNA5SP283-201ENST00000365604 119 ntBASIC4.53□□□□□ -1.68
RHOP08100 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHOP08100 RNY3P14-201ENST00000384309 102 ntBASIC4.53□□□□□ -1.68
RHOP08100 RNU6-921P-201ENST00000384361 107 ntBASIC4.53□□□□□ -1.68
RHOP08100 AC097374.1-203ENST00000400783 485 ntBASIC4.53□□□□□ -1.68
RHOP08100 AL359643.1-201ENST00000404109 423 ntBASIC4.53□□□□□ -1.68
RHOP08100 RAP1BP3-201ENST00000407180 549 ntBASIC4.53□□□□□ -1.68
RHOP08100 RNA5SP36-201ENST00000410197 133 ntBASIC4.53□□□□□ -1.68
RHOP08100 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.53□□□□□ -1.68
RHOP08100 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.53□□□□□ -1.68
RHOP08100 PRELID3BP11-201ENST00000414230 479 ntBASIC4.53□□□□□ -1.68
RHOP08100 AL356095.1-201ENST00000417217 199 ntBASIC4.53□□□□□ -1.68
RHOP08100 RPL30P16-201ENST00000419341 429 ntBASIC4.53□□□□□ -1.68
RHOP08100 AL157831.1-201ENST00000426134 473 ntBASIC4.53□□□□□ -1.68
RHOP08100 AL117339.2-201ENST00000430475 180 ntBASIC4.53□□□□□ -1.68
RHOP08100 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.53□□□□□ -1.68
RHOP08100 USP9YP12-201ENST00000450481 570 ntBASIC4.53□□□□□ -1.68
RHOP08100 AC091153.1-201ENST00000466297 402 ntBASIC4.53□□□□□ -1.68
RHOP08100 RPL35AP15-201ENST00000468042 339 ntBASIC4.53□□□□□ -1.68
RHOP08100 RPS15AP17-201ENST00000470598 390 ntBASIC4.53□□□□□ -1.68
RHOP08100 RPL21P129-201ENST00000491732 478 ntBASIC4.53□□□□□ -1.68
RHOP08100 AL132838.2-201ENST00000492041 314 ntBASIC4.53□□□□□ -1.68
RHOP08100 AC106872.3-201ENST00000495104 446 ntBASIC4.53□□□□□ -1.68
RHOP08100 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.53□□□□□ -1.68
RHOP08100 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.53□□□□□ -1.68
RHOP08100 OR5M7P-201ENST00000526140 972 ntBASIC4.53□□□□□ -1.68
RHOP08100 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.53□□□□□ -1.68
RHOP08100 AC068135.2-201ENST00000569293 1028 ntBASIC4.53□□□□□ -1.68
RHOP08100 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.53□□□□□ -1.68
RHOP08100 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.53□□□□□ -1.68
RHOP08100 BNIP3P8-201ENST00000597863 560 ntBASIC4.53□□□□□ -1.68
RHOP08100 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.53□□□□□ -1.68
RHOP08100 AL159169.3-201ENST00000608871 561 ntBASIC4.53□□□□□ -1.68
RHOP08100 AP001506.1-201ENST00000615444 211 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms