Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SNORA31.6-201ENST00000516241 130 ntBASIC5.67□□□□□ -1.5
THBS1P07996 RNA5SP206-201ENST00000516703 121 ntBASIC5.67□□□□□ -1.5
THBS1P07996 Y_RNA.710-201ENST00000516975 110 ntBASIC5.67□□□□□ -1.5
THBS1P07996 RNU6-570P-201ENST00000517051 105 ntBASIC5.67□□□□□ -1.5
THBS1P07996 HMGN1P28-201ENST00000521340 364 ntBASIC5.67□□□□□ -1.5
THBS1P07996 TOMM20P1-201ENST00000534518 427 ntBASIC5.67□□□□□ -1.5
THBS1P07996 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.67□□□□□ -1.5
THBS1P07996 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.67□□□□□ -1.5
THBS1P07996 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.67□□□□□ -1.5
THBS1P07996 AC109446.1-201ENST00000566172 220 ntBASIC5.67□□□□□ -1.5
THBS1P07996 AC141002.1-201ENST00000607025 279 ntBASIC5.67□□□□□ -1.5
THBS1P07996 AC023813.4-201ENST00000607580 580 ntBASIC5.67□□□□□ -1.5
THBS1P07996 AL590099.1-201ENST00000615276 138 ntBASIC5.67□□□□□ -1.5
THBS1P07996 MIR6778-201ENST00000617912 73 ntBASIC5.67□□□□□ -1.5
THBS1P07996 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.67□□□□□ -1.5
THBS1P07996 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.67□□□□□ -1.5
THBS1P07996 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
THBS1P07996 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
THBS1P07996 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
THBS1P07996 AC005725.1-201ENST00000577346 2607 ntBASIC5.67□□□□□ -1.5
THBS1P07996 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
THBS1P07996 Z95114.1-201ENST00000624264 14574 ntBASIC5.67□□□□□ -1.5
THBS1P07996 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
THBS1P07996 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.67□□□□□ -1.5
THBS1P07996 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
THBS1P07996 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
THBS1P07996 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.67□□□□□ -1.5
THBS1P07996 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.66□□□□□ -1.5
THBS1P07996 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.66□□□□□ -1.5
THBS1P07996 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.66□□□□□ -1.5
THBS1P07996 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
THBS1P07996 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 GNG5P2-201ENST00000372054 207 ntBASIC5.66□□□□□ -1.5
THBS1P07996 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
THBS1P07996 RNA5SP431-201ENST00000410312 120 ntBASIC5.66□□□□□ -1.5
THBS1P07996 RNU6-1156P-201ENST00000410365 100 ntBASIC5.66□□□□□ -1.5
THBS1P07996 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.66□□□□□ -1.5
THBS1P07996 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.66□□□□□ -1.5
THBS1P07996 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.66□□□□□ -1.5
THBS1P07996 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.66□□□□□ -1.5
THBS1P07996 AL389925.1-201ENST00000432257 728 ntBASIC5.66□□□□□ -1.5
THBS1P07996 AC073410.1-201ENST00000435125 589 ntBASIC5.66□□□□□ -1.5
THBS1P07996 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.66□□□□□ -1.5
THBS1P07996 GAPDHP59-201ENST00000435908 267 ntBASIC5.66□□□□□ -1.5
THBS1P07996 AC110602.1-201ENST00000437414 318 ntBASIC5.66□□□□□ -1.5
THBS1P07996 AC005094.1-201ENST00000440420 368 ntBASIC5.66□□□□□ -1.5
THBS1P07996 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 NDUFB1P2-201ENST00000449477 176 ntBASIC5.66□□□□□ -1.5
THBS1P07996 PPIAP3-201ENST00000450588 505 ntBASIC5.66□□□□□ -1.5
THBS1P07996 AC104164.1-201ENST00000460282 590 ntBASIC5.66□□□□□ -1.5
THBS1P07996 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
THBS1P07996 AC117503.1-201ENST00000472241 394 ntBASIC5.66□□□□□ -1.5
THBS1P07996 RPS27P20-201ENST00000492051 246 ntBASIC5.66□□□□□ -1.5
THBS1P07996 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.66□□□□□ -1.5
THBS1P07996 AC006512.2-201ENST00000543250 486 ntBASIC5.66□□□□□ -1.5
THBS1P07996 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.66□□□□□ -1.5
THBS1P07996 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.66□□□□□ -1.5
THBS1P07996 MIR132-201ENST00000591554 101 ntBASIC5.66□□□□□ -1.5
THBS1P07996 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.66□□□□□ -1.5
THBS1P07996 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.66□□□□□ -1.5
THBS1P07996 AL390123.1-201ENST00000603216 237 ntBASIC5.66□□□□□ -1.5
THBS1P07996 AP001823.1-201ENST00000604056 1003 ntBASIC5.66□□□□□ -1.5
THBS1P07996 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.66□□□□□ -1.5
THBS1P07996 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.66□□□□□ -1.5
THBS1P07996 AP000550.3-201ENST00000637734 379 ntBASIC5.66□□□□□ -1.5
THBS1P07996 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.66□□□□□ -1.5
THBS1P07996 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 AC116667.1-201ENST00000604855 2072 ntBASIC5.66□□□□□ -1.5
THBS1P07996 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
THBS1P07996 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.66□□□□□ -1.5
THBS1P07996 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
THBS1P07996 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
THBS1P07996 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
THBS1P07996 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
THBS1P07996 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.66□□□□□ -1.5
THBS1P07996 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.66□□□□□ -1.5
THBS1P07996 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
THBS1P07996 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
THBS1P07996 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
THBS1P07996 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
THBS1P07996 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
THBS1P07996 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
THBS1P07996 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
THBS1P07996 MIR335-201ENST00000362173 94 ntBASIC5.65□□□□□ -1.5
THBS1P07996 RNU6-1284P-201ENST00000363701 100 ntBASIC5.65□□□□□ -1.5
THBS1P07996 RNU6-842P-201ENST00000384269 107 ntBASIC5.65□□□□□ -1.5
THBS1P07996 AP000275.1-201ENST00000411943 390 ntBASIC5.65□□□□□ -1.5
THBS1P07996 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.65□□□□□ -1.5
THBS1P07996 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms