Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.34□□□□□ -1.87
RETP07949 NCOR1P1-202ENST00000486162 291 ntBASIC3.34□□□□□ -1.87
RETP07949 OR2A20P-203ENST00000498397 1268 ntBASIC3.34□□□□□ -1.87
RETP07949 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.34□□□□□ -1.87
RETP07949 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.34□□□□□ -1.87
RETP07949 SETP12-201ENST00000514068 805 ntBASIC3.34□□□□□ -1.87
RETP07949 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.34□□□□□ -1.87
RETP07949 CIR1P1-201ENST00000524055 1133 ntBASIC3.34□□□□□ -1.87
RETP07949 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RETP07949 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.34□□□□□ -1.87
RETP07949 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.34□□□□□ -1.87
RETP07949 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.34□□□□□ -1.87
RETP07949 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.34□□□□□ -1.87
RETP07949 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.34□□□□□ -1.87
RETP07949 MIR3690-201ENST00000580266 75 ntBASIC3.34□□□□□ -1.87
RETP07949 AP000919.1-202ENST00000581139 1264 ntBASIC3.34□□□□□ -1.87
RETP07949 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RETP07949 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.34□□□□□ -1.87
RETP07949 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.34□□□□□ -1.87
RETP07949 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.34□□□□□ -1.87
RETP07949 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.34□□□□□ -1.88
RETP07949 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
RETP07949 MTND5P27-201ENST00000428871 1720 ntBASIC3.33□□□□□ -1.88
RETP07949 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RETP07949 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
RETP07949 RPL7P26-201ENST00000333817 754 ntBASIC3.33□□□□□ -1.88
RETP07949 RNU6-252P-201ENST00000363232 107 ntBASIC3.33□□□□□ -1.88
RETP07949 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RETP07949 AL139095.1-201ENST00000404326 391 ntBASIC3.33□□□□□ -1.88
RETP07949 RSL24D1P1-201ENST00000404972 493 ntBASIC3.33□□□□□ -1.88
RETP07949 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.33□□□□□ -1.88
RETP07949 AL139413.1-201ENST00000421309 217 ntBASIC3.33□□□□□ -1.88
RETP07949 GLRXP1-201ENST00000423261 334 ntBASIC3.33□□□□□ -1.88
RETP07949 RPL23AP69-201ENST00000431134 458 ntBASIC3.33□□□□□ -1.88
RETP07949 AL353705.1-201ENST00000433468 480 ntBASIC3.33□□□□□ -1.88
RETP07949 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RETP07949 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.33□□□□□ -1.88
RETP07949 RPL7P29-201ENST00000437151 728 ntBASIC3.33□□□□□ -1.88
RETP07949 HIGD1AP11-201ENST00000438361 280 ntBASIC3.33□□□□□ -1.88
RETP07949 AC105402.2-201ENST00000438503 358 ntBASIC3.33□□□□□ -1.88
RETP07949 AC007000.2-201ENST00000442564 487 ntBASIC3.33□□□□□ -1.88
RETP07949 AC097499.1-201ENST00000444277 208 ntBASIC3.33□□□□□ -1.88
RETP07949 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.33□□□□□ -1.88
RETP07949 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RETP07949 RPL29P29-201ENST00000448725 423 ntBASIC3.33□□□□□ -1.88
RETP07949 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.33□□□□□ -1.88
RETP07949 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.33□□□□□ -1.88
RETP07949 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.33□□□□□ -1.88
RETP07949 HMGN2P16-201ENST00000456802 261 ntBASIC3.33□□□□□ -1.88
RETP07949 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.33□□□□□ -1.88
RETP07949 RPL7P38-201ENST00000488396 739 ntBASIC3.33□□□□□ -1.88
RETP07949 AC010486.1-201ENST00000511793 424 ntBASIC3.33□□□□□ -1.88
RETP07949 SNORA70.19-201ENST00000516717 90 ntBASIC3.33□□□□□ -1.88
RETP07949 AC103833.1-201ENST00000517442 172 ntBASIC3.33□□□□□ -1.88
RETP07949 OR5AK3P-201ENST00000527486 1297 ntBASIC3.33□□□□□ -1.88
RETP07949 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.33□□□□□ -1.88
RETP07949 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.33□□□□□ -1.88
RETP07949 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.33□□□□□ -1.88
RETP07949 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.33□□□□□ -1.88
RETP07949 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.33□□□□□ -1.88
RETP07949 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.33□□□□□ -1.88
RETP07949 AC113194.1-201ENST00000606037 500 ntBASIC3.33□□□□□ -1.88
RETP07949 AC009464.1-201ENST00000615731 469 ntBASIC3.33□□□□□ -1.88
RETP07949 AC138932.5-201ENST00000617759 563 ntBASIC3.33□□□□□ -1.88
RETP07949 AP006248.3-201ENST00000623580 594 ntBASIC3.33□□□□□ -1.88
RETP07949 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RETP07949 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.33□□□□□ -1.88
RETP07949 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.33□□□□□ -1.88
RETP07949 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.32□□□□□ -1.88
RETP07949 AC002546.1-201ENST00000588041 2504 ntBASIC3.32□□□□□ -1.88
RETP07949 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.32□□□□□ -1.88
RETP07949 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RETP07949 RNU6-600P-201ENST00000362524 99 ntBASIC3.32□□□□□ -1.88
RETP07949 RNA5SP391-201ENST00000363456 119 ntBASIC3.32□□□□□ -1.88
RETP07949 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RETP07949 ATF1P1-201ENST00000406040 927 ntBASIC3.32□□□□□ -1.88
RETP07949 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.32□□□□□ -1.88
RETP07949 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.32□□□□□ -1.88
RETP07949 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.32□□□□□ -1.88
RETP07949 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.32□□□□□ -1.88
RETP07949 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.32□□□□□ -1.88
RETP07949 AC111193.1-201ENST00000504097 155 ntBASIC3.32□□□□□ -1.88
RETP07949 AC090071.1-201ENST00000507713 644 ntBASIC3.32□□□□□ -1.88
RETP07949 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RETP07949 AC093755.1-201ENST00000512950 1023 ntBASIC3.32□□□□□ -1.88
RETP07949 AC026801.2-201ENST00000515352 425 ntBASIC3.32□□□□□ -1.88
RETP07949 FABP5P12-201ENST00000515543 389 ntBASIC3.32□□□□□ -1.88
RETP07949 RNA5SP380-201ENST00000517190 98 ntBASIC3.32□□□□□ -1.88
RETP07949 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.32□□□□□ -1.88
RETP07949 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.32□□□□□ -1.88
RETP07949 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.32□□□□□ -1.88
RETP07949 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.32□□□□□ -1.88
RETP07949 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.32□□□□□ -1.88
RETP07949 AC025918.2-201ENST00000558683 763 ntBASIC3.32□□□□□ -1.88
RETP07949 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.32□□□□□ -1.88
RETP07949 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.32□□□□□ -1.88
RETP07949 AL162713.1-201ENST00000604480 262 ntBASIC3.32□□□□□ -1.88
RETP07949 AC018618.2-201ENST00000604770 446 ntBASIC3.32□□□□□ -1.88
RETP07949 AC011374.2-201ENST00000607135 526 ntBASIC3.32□□□□□ -1.88
RETP07949 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms