Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC092650.2-201ENST00000619984 902 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC018816.2-201ENST00000621460 353 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DOAP06340 OR5BR1P-201ENST00000524992 1330 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DOAP06340 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DOAP06340 ERCC6-202ENST00000374127 1782 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DOAP06340 AL512646.1-201ENST00000269395 1077 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 AC067945.1-201ENST00000342609 618 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 Y_RNA.256-201ENST00000364594 104 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 SNORA51.12-201ENST00000384448 134 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 MIR554-201ENST00000384874 96 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 AC245052.5-201ENST00000416320 649 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 CCDC58P2-201ENST00000417131 366 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 DPPA2P2-201ENST00000418220 897 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 MTCO3P1-205ENST00000422088 832 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 RPL23AP89-201ENST00000439324 255 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 RPS29P7-201ENST00000439662 171 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 PAXBP1P1-201ENST00000449315 447 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 RPL18AP17-201ENST00000455326 198 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 OR4G11P-201ENST00000492842 939 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 AC020593.1-201ENST00000507399 299 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 AF131216.2-201ENST00000512316 564 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 FTH1P11-201ENST00000517577 551 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 AL358913.1-201ENST00000554342 121 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 AC120057.2-201ENST00000571520 271 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 AC006130.2-201ENST00000586202 326 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 AC080013.4-201ENST00000607624 649 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DOAP06340 CDR1-202ENST00000625883 1485 ntBASIC4.86□□□□□ -1.63
HLA-DOAP06340 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DOAP06340 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DOAP06340 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DOAP06340 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DOAP06340 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DOAP06340 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DOAP06340 AL031985.3-201ENST00000565390 2449 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DOAP06340 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DOAP06340 RNU1-85P-201ENST00000364127 164 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 RNU6-723P-201ENST00000383973 107 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 RNU6-1151P-201ENST00000384684 107 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 TMSB4XP8-201ENST00000402089 135 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 RN7SKP56-201ENST00000410513 331 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC109780.2-201ENST00000413467 845 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 TMSB4XP6-201ENST00000415187 135 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC092634.6-201ENST00000418558 192 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 TMSB4XP1-201ENST00000424567 135 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AL512649.1-201ENST00000428997 581 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 UBE2FP3-201ENST00000436366 524 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AL662791.1-201ENST00000441992 928 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC244505.5-201ENST00000443639 207 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 WASF1P1-201ENST00000447560 1131 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 NPM1P39-201ENST00000449818 867 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 RPL7P31-201ENST00000450192 724 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC092989.1-201ENST00000481235 277 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC146944.2-203ENST00000502493 354 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 FAM92A1P2-202ENST00000504766 877 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 SAP18P1-201ENST00000512058 390 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 NPM1P41-201ENST00000512920 831 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC139495.1-202ENST00000513164 354 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 RNU6-202P-201ENST00000515998 96 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 DEFB108A-201ENST00000530110 222 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC124947.2-202ENST00000552735 133 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC074050.1-201ENST00000563247 211 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms