Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 FTH1P24-201ENST00000503502 462 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 HNRNPKP5-201ENST00000515300 253 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 SNORA48.10-201ENST00000516965 160 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN1O95832 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.56□□□□□ -1.84
CLDN1O95832 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN1O95832 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN1O95832 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN1O95832 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN1O95832 AC138915.2-201ENST00000569776 97 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 ISCA1P3-201ENST00000577104 373 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 MIR4513-201ENST00000581077 86 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 PIGPP4-201ENST00000584447 307 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN1O95832 AC110760.3-201ENST00000598794 467 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 AC068790.5-201ENST00000602741 355 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN1O95832 AC112220.3-201ENST00000605502 502 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 AC091946.2-201ENST00000606105 291 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN1O95832 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN1O95832 AC069209.1-201ENST00000619282 651 ntBASIC3.56□□□□□ -1.84
CLDN1O95832 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN1O95832 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN1O95832 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN1O95832 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN1O95832 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
CLDN1O95832 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN1O95832 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN1O95832 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN1O95832 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN1O95832 AC107982.1-201ENST00000507171 1300 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 AC016716.1-201ENST00000265882 708 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 SNORD3H-201ENST00000384486 214 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 SNORA48.2-201ENST00000390926 124 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 AL590084.2-201ENST00000401481 382 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 HNRNPDP2-201ENST00000406475 478 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CLDN1O95832 AC096664.2-201ENST00000411843 406 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN1O95832 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN1O95832 AC245052.5-201ENST00000416320 649 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 OR4F13P-201ENST00000428478 931 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 NANOGP6-201ENST00000429190 847 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
CLDN1O95832 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN1O95832 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN1O95832 RPL7P1-201ENST00000468161 747 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN1O95832 AC104619.4-201ENST00000510773 249 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN1O95832 OR5BM1P-201ENST00000512021 366 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN1O95832 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN1O95832 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN1O95832 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.55□□□□□ -1.84
CLDN1O95832 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN1O95832 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN1O95832 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN1O95832 UBE2NP1-201ENST00000545592 458 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 ELOCP32-201ENST00000548625 324 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN1O95832 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN1O95832 EIF5A2P1-201ENST00000564027 460 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.55□□□□□ -1.84
CLDN1O95832 NF1P5-201ENST00000588287 448 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 AC004223.2-201ENST00000590309 544 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN1O95832 AC103881.1-201ENST00000603476 538 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 Z99497.2-201ENST00000603634 310 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 AC121247.2-201ENST00000604776 136 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 AC069304.2-201ENST00000605154 435 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 AC064807.4-201ENST00000607201 407 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 OR6R2P-201ENST00000609216 300 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 AC120349.2-201ENST00000625002 298 ntBASIC3.55□□□□□ -1.84
CLDN1O95832 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN1O95832 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CLDN1O95832 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.55□□□□□ -1.84
CLDN1O95832 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CLDN1O95832 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN1O95832 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN1O95832 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN1O95832 AP004289.2-201ENST00000444413 1457 ntBASIC3.54□□□□□ -1.84
CLDN1O95832 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN1O95832 CDR1-202ENST00000625883 1485 ntBASIC3.54□□□□□ -1.84
CLDN1O95832 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN1O95832 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN1O95832 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN1O95832 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN1O95832 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN1O95832 RNU6-1293P-201ENST00000384077 107 ntBASIC3.54□□□□□ -1.84
CLDN1O95832 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN1O95832 AL035423.1-201ENST00000420331 213 ntBASIC3.54□□□□□ -1.84
CLDN1O95832 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN1O95832 AL391219.1-201ENST00000422570 483 ntBASIC3.54□□□□□ -1.84
CLDN1O95832 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN1O95832 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms