Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC018618.2-201ENST00000604770 446 ntBASIC2.59□□□□□ -1.99
CPSF4O95639 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.59□□□□□ -1.99
CPSF4O95639 MIR8057-201ENST00000620957 69 ntBASIC2.59□□□□□ -1.99
CPSF4O95639 MIR3651-201ENST00000630427 90 ntBASIC2.59□□□□□ -1.99
CPSF4O95639 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.59□□□□□ -2
CPSF4O95639 SEPT7P7-201ENST00000420492 1301 ntBASIC2.59□□□□□ -2
CPSF4O95639 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.59□□□□□ -2
CPSF4O95639 MTND4P21-201ENST00000453886 1357 ntBASIC2.59□□□□□ -2
CPSF4O95639 MAPK10-362ENST00000641864 4484 ntBASIC2.59□□□□□ -2
CPSF4O95639 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.58□□□□□ -2
CPSF4O95639 AL589826.1-201ENST00000340697 249 ntBASIC2.58□□□□□ -2
CPSF4O95639 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.58□□□□□ -2
CPSF4O95639 SNORA18.3-201ENST00000384122 132 ntBASIC2.58□□□□□ -2
CPSF4O95639 MTATP6P31-201ENST00000406985 692 ntBASIC2.58□□□□□ -2
CPSF4O95639 AL592148.1-201ENST00000413568 445 ntBASIC2.58□□□□□ -2
CPSF4O95639 AC004022.2-201ENST00000413824 193 ntBASIC2.58□□□□□ -2
CPSF4O95639 VTA1P1-201ENST00000414044 866 ntBASIC2.58□□□□□ -2
CPSF4O95639 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.58□□□□□ -2
CPSF4O95639 AL389915.1-201ENST00000422463 466 ntBASIC2.58□□□□□ -2
CPSF4O95639 RPL21P40-201ENST00000428586 483 ntBASIC2.58□□□□□ -2
CPSF4O95639 YWHAZP7-201ENST00000436906 631 ntBASIC2.58□□□□□ -2
CPSF4O95639 RPL23AP23-201ENST00000452590 471 ntBASIC2.58□□□□□ -2
CPSF4O95639 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.58□□□□□ -2
CPSF4O95639 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.58□□□□□ -2
CPSF4O95639 HMGB1P25-201ENST00000468402 607 ntBASIC2.58□□□□□ -2
CPSF4O95639 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.58□□□□□ -2
CPSF4O95639 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.58□□□□□ -2
CPSF4O95639 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.58□□□□□ -2
CPSF4O95639 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.58□□□□□ -2
CPSF4O95639 AC002456.2-201ENST00000509356 380 ntBASIC2.58□□□□□ -2
CPSF4O95639 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.58□□□□□ -2
CPSF4O95639 CIR1P1-201ENST00000524055 1133 ntBASIC2.58□□□□□ -2
CPSF4O95639 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.58□□□□□ -2
CPSF4O95639 OR5AK3P-201ENST00000527486 1297 ntBASIC2.58□□□□□ -2
CPSF4O95639 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.58□□□□□ -2
CPSF4O95639 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.58□□□□□ -2
CPSF4O95639 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.58□□□□□ -2
CPSF4O95639 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.58□□□□□ -2
CPSF4O95639 OR4H6P-202ENST00000603819 340 ntBASIC2.58□□□□□ -2
CPSF4O95639 AC008277.2-201ENST00000605196 797 ntBASIC2.58□□□□□ -2
CPSF4O95639 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.58□□□□□ -2
CPSF4O95639 MIR6798-201ENST00000612887 67 ntBASIC2.58□□□□□ -2
CPSF4O95639 AL354696.1-201ENST00000614652 497 ntBASIC2.58□□□□□ -2
CPSF4O95639 MIR1264-201ENST00000616374 69 ntBASIC2.58□□□□□ -2
CPSF4O95639 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.58□□□□□ -2
CPSF4O95639 CR381653.2-201ENST00000624041 768 ntBASIC2.58□□□□□ -2
CPSF4O95639 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.58□□□□□ -2
CPSF4O95639 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.58□□□□□ -2
CPSF4O95639 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CPSF4O95639 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.58□□□□□ -2
CPSF4O95639 MTND5P7-201ENST00000413558 1798 ntBASIC2.58□□□□□ -2
CPSF4O95639 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.58□□□□□ -2
CPSF4O95639 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.57□□□□□ -2
CPSF4O95639 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CPSF4O95639 METTL21EP-201ENST00000298105 713 ntBASIC2.57□□□□□ -2
CPSF4O95639 UBE2V1P15-201ENST00000407776 448 ntBASIC2.57□□□□□ -2
CPSF4O95639 MIR1303-201ENST00000408625 86 ntBASIC2.57□□□□□ -2
CPSF4O95639 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.57□□□□□ -2
CPSF4O95639 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.57□□□□□ -2
CPSF4O95639 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.57□□□□□ -2
CPSF4O95639 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.57□□□□□ -2
CPSF4O95639 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CPSF4O95639 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.57□□□□□ -2
CPSF4O95639 BTBD7P2-201ENST00000441962 620 ntBASIC2.57□□□□□ -2
CPSF4O95639 AL500527.1-201ENST00000448532 255 ntBASIC2.57□□□□□ -2
CPSF4O95639 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.57□□□□□ -2
CPSF4O95639 AC140076.1-201ENST00000449897 361 ntBASIC2.57□□□□□ -2
CPSF4O95639 HMGB3P30-201ENST00000457863 606 ntBASIC2.57□□□□□ -2
CPSF4O95639 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.57□□□□□ -2
CPSF4O95639 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.57□□□□□ -2
CPSF4O95639 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.57□□□□□ -2
CPSF4O95639 RNU2-58P-201ENST00000516403 183 ntBASIC2.57□□□□□ -2
CPSF4O95639 RN7SKP57-201ENST00000517248 293 ntBASIC2.57□□□□□ -2
CPSF4O95639 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.57□□□□□ -2
CPSF4O95639 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.57□□□□□ -2
CPSF4O95639 AC025918.2-201ENST00000558683 763 ntBASIC2.57□□□□□ -2
CPSF4O95639 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.57□□□□□ -2
CPSF4O95639 AC006270.2-201ENST00000578523 652 ntBASIC2.57□□□□□ -2
CPSF4O95639 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.57□□□□□ -2
CPSF4O95639 AC007687.1-201ENST00000602704 304 ntBASIC2.57□□□□□ -2
CPSF4O95639 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CPSF4O95639 AC004777.1-201ENST00000624317 287 ntBASIC2.57□□□□□ -2
CPSF4O95639 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CPSF4O95639 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.57□□□□□ -2
CPSF4O95639 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.57□□□□□ -2
CPSF4O95639 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.57□□□□□ -2
CPSF4O95639 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.57□□□□□ -2
CPSF4O95639 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CPSF4O95639 AC109315.1-201ENST00000584143 1347 ntBASIC2.57□□□□□ -2
CPSF4O95639 GABPAP-201ENST00000419271 1356 ntBASIC2.57□□□□□ -2
CPSF4O95639 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.57□□□□□ -2
CPSF4O95639 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CPSF4O95639 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CPSF4O95639 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.56□□□□□ -2
CPSF4O95639 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CPSF4O95639 AF127577.6-201ENST00000623352 2191 ntBASIC2.56□□□□□ -2
CPSF4O95639 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.56□□□□□ -2
CPSF4O95639 OR5H2-201ENST00000355273 945 ntBASIC2.56□□□□□ -2
CPSF4O95639 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.56□□□□□ -2
CPSF4O95639 RPL31P45-201ENST00000419532 356 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms