Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.83□□□□□ -1.8
NKX2-2O95096 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.83□□□□□ -1.8
NKX2-2O95096 AL356057.1-201ENST00000533798 831 ntBASIC3.83□□□□□ -1.8
NKX2-2O95096 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.83□□□□□ -1.8
NKX2-2O95096 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.83□□□□□ -1.8
NKX2-2O95096 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.83□□□□□ -1.8
NKX2-2O95096 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.83□□□□□ -1.8
NKX2-2O95096 AC012435.1-202ENST00000568772 240 ntBASIC3.83□□□□□ -1.8
NKX2-2O95096 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-2O95096 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.83□□□□□ -1.8
NKX2-2O95096 AC110760.3-201ENST00000598794 467 ntBASIC3.83□□□□□ -1.8
NKX2-2O95096 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-2O95096 AC004853.1-201ENST00000604902 698 ntBASIC3.83□□□□□ -1.8
NKX2-2O95096 AC097468.3-201ENST00000607956 456 ntBASIC3.83□□□□□ -1.8
NKX2-2O95096 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-2O95096 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-2O95096 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-2O95096 MIR8059-201ENST00000620427 81 ntBASIC3.83□□□□□ -1.8
NKX2-2O95096 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-2O95096 AC007494.3-201ENST00000624660 743 ntBASIC3.83□□□□□ -1.8
NKX2-2O95096 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.83□□□□□ -1.8
NKX2-2O95096 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-2O95096 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.83□□□□□ -1.8
NKX2-2O95096 AL049780.3-201ENST00000624612 1583 ntBASIC3.83□□□□□ -1.8
NKX2-2O95096 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
NKX2-2O95096 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.83□□□□□ -1.8
NKX2-2O95096 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-2O95096 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-2O95096 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-2O95096 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-2O95096 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-2O95096 AL133412.1-201ENST00000380194 2992 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-2O95096 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-2O95096 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
NKX2-2O95096 AC092447.10-201ENST00000620607 1652 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 MTND4P16-201ENST00000466108 1367 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 RNU6-1249P-201ENST00000363237 111 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 Y_RNA.234-201ENST00000364409 97 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 RNA5SP513-201ENST00000364648 118 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 RHOT1P2-201ENST00000366423 333 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-2O95096 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-2O95096 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-2O95096 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NKX2-2O95096 MIR513A2-201ENST00000385249 127 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 OR6C69P-201ENST00000394268 893 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 RPS24P12-201ENST00000402084 394 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 FAR2P2-201ENST00000413041 594 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 HSFY4P-201ENST00000415994 1181 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AL807761.1-201ENST00000417622 171 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AC092832.1-201ENST00000422934 400 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 CHIAP3-201ENST00000423668 1133 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 UBE2D3P4-201ENST00000441973 436 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-2O95096 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-2O95096 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-2O95096 RPL7P52-201ENST00000449200 742 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 RPS27AP8-201ENST00000452665 445 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-2O95096 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.82□□□□□ -1.8
NKX2-2O95096 HMGB3P30-201ENST00000457863 606 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AP000873.1-201ENST00000463987 400 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-2O95096 AC017015.1-201ENST00000477387 286 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 RN7SL481P-201ENST00000477764 299 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AC105137.1-201ENST00000484355 562 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AC109486.1-201ENST00000486833 374 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 HMGB1P36-201ENST00000487709 576 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AC093267.1-201ENST00000489176 961 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AC078817.1-201ENST00000492623 435 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 RPS27AP13-201ENST00000498403 237 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 PRELID3BP7-201ENST00000503606 469 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-2O95096 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-2O95096 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-2O95096 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-2O95096 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.82□□□□□ -1.8
NKX2-2O95096 RNA5SP154-201ENST00000516193 111 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 RNU7-143P-201ENST00000516781 65 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-2O95096 AP004247.1-201ENST00000531556 1289 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.82□□□□□ -1.8
NKX2-2O95096 AC091515.1-201ENST00000548110 679 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-2O95096 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.82□□□□□ -1.8
NKX2-2O95096 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-2O95096 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-2O95096 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-2O95096 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-2O95096 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
NKX2-2O95096 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-2O95096 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.82□□□□□ -1.8
NKX2-2O95096 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-2O95096 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-2O95096 AC112187.2-201ENST00000604345 283 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 SNX18P1Y-201ENST00000616231 511 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 MIR7151-201ENST00000617477 60 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms