Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
PCF11O94913 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCF11O94913 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PCF11O94913 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PCF11O94913 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCF11O94913 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PCF11O94913 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.05□□□□□ -1.76
PCF11O94913 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.05□□□□□ -1.76
PCF11O94913 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCF11O94913 MIR365B-201ENST00000362317 111 ntBASIC4.05□□□□□ -1.76
PCF11O94913 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.05□□□□□ -1.76
PCF11O94913 HSPD1P16-201ENST00000402302 394 ntBASIC4.05□□□□□ -1.76
PCF11O94913 Y_RNA.595-201ENST00000410403 105 ntBASIC4.05□□□□□ -1.76
PCF11O94913 AC048351.1-201ENST00000420064 602 ntBASIC4.05□□□□□ -1.76
PCF11O94913 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.05□□□□□ -1.76
PCF11O94913 HMGB1P15-201ENST00000453854 435 ntBASIC4.05□□□□□ -1.76
PCF11O94913 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.05□□□□□ -1.76
PCF11O94913 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.05□□□□□ -1.76
PCF11O94913 IGKV2-36-201ENST00000519999 223 ntBASIC4.05□□□□□ -1.76
PCF11O94913 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.05□□□□□ -1.76
PCF11O94913 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.05□□□□□ -1.76
PCF11O94913 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.05□□□□□ -1.76
PCF11O94913 AC016717.2-201ENST00000609089 5141 ntBASIC4.04□□□□□ -1.76
PCF11O94913 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PCF11O94913 AL592045.1-201ENST00000429867 352 ntBASIC4.04□□□□□ -1.76
PCF11O94913 OR2B8P-201ENST00000432841 938 ntBASIC4.04□□□□□ -1.76
PCF11O94913 RPS20P5-201ENST00000434808 360 ntBASIC4.04□□□□□ -1.76
PCF11O94913 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.04□□□□□ -1.76
PCF11O94913 MTND2P13-201ENST00000577438 1039 ntBASIC4.04□□□□□ -1.76
PCF11O94913 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCF11O94913 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.04□□□□□ -1.76
PCF11O94913 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PCF11O94913 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
PCF11O94913 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PCF11O94913 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PCF11O94913 RPL21P132-201ENST00000331267 462 ntBASIC4.03□□□□□ -1.76
PCF11O94913 AC004987.3-201ENST00000413879 771 ntBASIC4.03□□□□□ -1.76
PCF11O94913 AL356806.1-201ENST00000422524 916 ntBASIC4.03□□□□□ -1.76
PCF11O94913 AC245517.2-201ENST00000442890 346 ntBASIC4.03□□□□□ -1.76
PCF11O94913 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.03□□□□□ -1.76
PCF11O94913 AC108729.3-201ENST00000513484 108 ntBASIC4.03□□□□□ -1.76
PCF11O94913 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.03□□□□□ -1.76
PCF11O94913 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.03□□□□□ -1.76
PCF11O94913 AC067838.1-201ENST00000606064 577 ntBASIC4.03□□□□□ -1.76
PCF11O94913 NSRP1P1-201ENST00000444067 1693 ntBASIC4.03□□□□□ -1.76
PCF11O94913 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCF11O94913 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
PCF11O94913 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCF11O94913 MIR3074-201ENST00000384885 81 ntBASIC4.02□□□□□ -1.77
PCF11O94913 RPLP0P7-201ENST00000416050 667 ntBASIC4.02□□□□□ -1.77
PCF11O94913 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.02□□□□□ -1.77
PCF11O94913 AC245517.4-201ENST00000448601 281 ntBASIC4.02□□□□□ -1.77
PCF11O94913 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.02□□□□□ -1.77
PCF11O94913 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC4.02□□□□□ -1.77
PCF11O94913 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.02□□□□□ -1.77
PCF11O94913 AC078814.3-201ENST00000553036 491 ntBASIC4.02□□□□□ -1.77
PCF11O94913 AL391156.1-201ENST00000554965 554 ntBASIC4.02□□□□□ -1.77
PCF11O94913 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.02□□□□□ -1.77
PCF11O94913 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.02□□□□□ -1.77
PCF11O94913 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.02□□□□□ -1.77
PCF11O94913 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.02□□□□□ -1.77
PCF11O94913 AC010620.2-201ENST00000600135 313 ntBASIC4.02□□□□□ -1.77
PCF11O94913 AP003117.2-201ENST00000606010 545 ntBASIC4.02□□□□□ -1.77
PCF11O94913 AC022960.2-201ENST00000616300 666 ntBASIC4.02□□□□□ -1.77
PCF11O94913 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.02□□□□□ -1.77
PCF11O94913 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCF11O94913 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCF11O94913 RNU6-1159P-201ENST00000362933 107 ntBASIC4.02□□□□□ -1.77
PCF11O94913 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.02□□□□□ -1.77
PCF11O94913 RPL23AP15-201ENST00000450202 459 ntBASIC4.02□□□□□ -1.77
PCF11O94913 AC243772.1-201ENST00000451620 410 ntBASIC4.02□□□□□ -1.77
PCF11O94913 AC091179.1-201ENST00000461606 579 ntBASIC4.02□□□□□ -1.77
PCF11O94913 RN7SL297P-201ENST00000483161 293 ntBASIC4.02□□□□□ -1.77
PCF11O94913 RANP3-201ENST00000530970 276 ntBASIC4.02□□□□□ -1.77
PCF11O94913 AP000857.1-201ENST00000532151 543 ntBASIC4.02□□□□□ -1.77
PCF11O94913 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.02□□□□□ -1.77
PCF11O94913 MIR4781-201ENST00000585250 76 ntBASIC4.02□□□□□ -1.77
PCF11O94913 NRBF2P1-201ENST00000587407 859 ntBASIC4.02□□□□□ -1.77
PCF11O94913 BMS1P7-201ENST00000602440 1052 ntBASIC4.02□□□□□ -1.77
PCF11O94913 FRG1DP-201ENST00000635586 771 ntBASIC4.02□□□□□ -1.77
PCF11O94913 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PCF11O94913 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PCF11O94913 WWP1P1-201ENST00000466609 2769 ntBASIC4.01□□□□□ -1.77
PCF11O94913 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCF11O94913 AC087565.3-202ENST00000642085 1603 ntBASIC4.01□□□□□ -1.77
PCF11O94913 RNVU1-3-201ENST00000364313 161 ntBASIC4.01□□□□□ -1.77
PCF11O94913 AL512633.1-201ENST00000399931 655 ntBASIC4.01□□□□□ -1.77
PCF11O94913 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.01□□□□□ -1.77
PCF11O94913 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCF11O94913 MTND2P17-201ENST00000550281 688 ntBASIC4.01□□□□□ -1.77
PCF11O94913 AC009063.1-201ENST00000563342 702 ntBASIC4.01□□□□□ -1.77
PCF11O94913 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.01□□□□□ -1.77
PCF11O94913 Z99129.2-201ENST00000619967 314 ntBASIC4.01□□□□□ -1.77
PCF11O94913 WARS-244ENST00000627608 123 ntTSL 5 BASIC4.01□□□□□ -1.77
PCF11O94913 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCF11O94913 BX005019.1-201ENST00000561881 1810 ntBASIC4□□□□□ -1.77
PCF11O94913 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4□□□□□ -1.77
PCF11O94913 RNU6-14P-201ENST00000384630 106 ntBASIC4□□□□□ -1.77
PCF11O94913 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4□□□□□ -1.77
PCF11O94913 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms