Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 MTND4P18-201ENST00000447010 465 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.68□□□□□ -1.82
LMX1BO60663 OR9M1P-201ENST00000459641 921 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.68□□□□□ -1.82
LMX1BO60663 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.68□□□□□ -1.82
LMX1BO60663 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.68□□□□□ -1.82
LMX1BO60663 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.68□□□□□ -1.82
LMX1BO60663 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.68□□□□□ -1.82
LMX1BO60663 PGBD4P4-201ENST00000509673 613 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.68□□□□□ -1.82
LMX1BO60663 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.68□□□□□ -1.82
LMX1BO60663 AC023632.4-201ENST00000517783 191 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 AP000790.1-201ENST00000528891 737 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.68□□□□□ -1.82
LMX1BO60663 MIR4528-201ENST00000577763 90 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 MIR4429-201ENST00000580105 73 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.68□□□□□ -1.82
LMX1BO60663 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.68□□□□□ -1.82
LMX1BO60663 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.68□□□□□ -1.82
LMX1BO60663 AC023813.4-201ENST00000607580 580 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 AL354760.1-201ENST00000608357 643 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LMX1BO60663 uc_338.13-201ENST00000618243 179 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.68□□□□□ -1.82
LMX1BO60663 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.68□□□□□ -1.82
LMX1BO60663 AC015908.5-201ENST00000623289 343 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 AC112484.5-201ENST00000624189 228 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 CDRT1-208ENST00000630868 794 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
LMX1BO60663 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LMX1BO60663 NOL8P1-201ENST00000508336 3529 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LMX1BO60663 EIF2AP4-201ENST00000424793 1781 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.68□□□□□ -1.82
LMX1BO60663 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 AC090971.4-201ENST00000560291 1800 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LMX1BO60663 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LMX1BO60663 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 TEX21P-201ENST00000447107 1476 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LMX1BO60663 MTCO1P23-201ENST00000415223 1526 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 OR10J6P-201ENST00000289731 930 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LMX1BO60663 RNU1-132P-201ENST00000364300 164 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.67□□□□□ -1.82
LMX1BO60663 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LMX1BO60663 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LMX1BO60663 NCSTNP1-201ENST00000406229 144 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 RNU2-65P-201ENST00000410162 185 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 RNA5SP36-201ENST00000410197 133 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 RNA5SP306-201ENST00000411087 107 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 MTND1P21-201ENST00000412991 285 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.67□□□□□ -1.82
LMX1BO60663 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.67□□□□□ -1.82
LMX1BO60663 AC004552.1-201ENST00000419089 348 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.67□□□□□ -1.82
LMX1BO60663 AC092647.1-201ENST00000420654 287 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 RBMY1KP-201ENST00000423480 476 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AC093698.1-201ENST00000423843 571 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.67□□□□□ -1.82
LMX1BO60663 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.67□□□□□ -1.82
LMX1BO60663 AL031663.1-201ENST00000437445 219 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.67□□□□□ -1.82
LMX1BO60663 RBMX2P4-201ENST00000441256 376 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 EEF1E1P1-201ENST00000446998 430 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 RPS26P3-201ENST00000470205 348 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 RN7SL585P-201ENST00000470538 280 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AC022034.3-201ENST00000471393 478 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 AC006517.1-201ENST00000480485 328 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AC090543.2-201ENST00000483963 348 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AC004057.1-201ENST00000485827 348 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 MTCO1P30-201ENST00000515244 580 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.67□□□□□ -1.82
LMX1BO60663 DEFB131D-201ENST00000526803 184 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.67□□□□□ -1.82
LMX1BO60663 TRAV8-5-201ENST00000537369 341 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.67□□□□□ -1.82
LMX1BO60663 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.67□□□□□ -1.82
LMX1BO60663 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.67□□□□□ -1.82
LMX1BO60663 CYCSP2-201ENST00000558168 301 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AC009063.1-201ENST00000563342 702 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AC087481.2-201ENST00000565492 330 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AC093519.1-201ENST00000566109 298 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.67□□□□□ -1.82
LMX1BO60663 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.67□□□□□ -1.82
LMX1BO60663 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.67□□□□□ -1.82
LMX1BO60663 AC022916.3-201ENST00000592961 742 ntBASIC3.67□□□□□ -1.82
LMX1BO60663 AC008687.2-201ENST00000597865 520 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms