Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXS1O43638 AC006466.1-201ENST00000438721 289 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 HMGB1P18-201ENST00000438801 619 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXS1O43638 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXS1O43638 AC010733.1-201ENST00000451515 401 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 FGF7P3-201ENST00000454645 303 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 AL356981.1-201ENST00000454879 684 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 RPL37P3-201ENST00000456825 293 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXS1O43638 AC090453.1-201ENST00000495560 436 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXS1O43638 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXS1O43638 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXS1O43638 PSMA2P1-201ENST00000526365 646 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 SCOCP1-201ENST00000554676 349 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 AL049839.1-201ENST00000556151 657 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXS1O43638 MIR4742-201ENST00000581069 85 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 AC104237.2-201ENST00000612456 443 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 AC093913.1-201ENST00000614178 329 ntBASIC4.61□□□□□ -1.67
FOXS1O43638 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXS1O43638 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXS1O43638 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXS1O43638 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXS1O43638 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXS1O43638 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXS1O43638 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXS1O43638 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXS1O43638 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXS1O43638 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXS1O43638 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
FOXS1O43638 AL118496.1-201ENST00000440201 1812 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXS1O43638 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXS1O43638 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
FOXS1O43638 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXS1O43638 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXS1O43638 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
FOXS1O43638 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXS1O43638 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXS1O43638 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
FOXS1O43638 RNU6-254P-201ENST00000363377 107 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 RNU6-744P-201ENST00000365557 107 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 SNORD42.2-201ENST00000365570 69 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 RNU6-1316P-201ENST00000384242 108 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 RNU6-729P-201ENST00000384399 107 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 U3.30-201ENST00000391308 210 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AL078604.1-201ENST00000404609 466 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
FOXS1O43638 RNU2-9P-201ENST00000410194 145 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AC073136.2-201ENST00000417282 849 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AC234781.4-201ENST00000419384 244 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXS1O43638 AC104333.2-201ENST00000422630 192 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 MTCYBP8-201ENST00000422855 651 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 GPR143P-201ENST00000434155 205 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AL772161.1-201ENST00000439130 476 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXS1O43638 AC006480.1-201ENST00000449887 378 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 CACYBPP2-201ENST00000453625 678 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXS1O43638 APOOP2-201ENST00000461561 539 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXS1O43638 MRPS17P3-201ENST00000465453 385 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXS1O43638 AC233702.1-201ENST00000482905 502 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AP001025.2-201ENST00000490908 477 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 RNU6-1170P-201ENST00000515974 106 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 RNU6-1314P-201ENST00000517139 104 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AC090572.1-201ENST00000519251 160 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXS1O43638 AC022616.3-201ENST00000523940 148 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.6□□□□□ -1.67
FOXS1O43638 ELOCP31-201ENST00000540463 467 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.6□□□□□ -1.67
FOXS1O43638 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXS1O43638 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.6□□□□□ -1.67
FOXS1O43638 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXS1O43638 LARP7P2-201ENST00000575306 125 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXS1O43638 MIR3667-201ENST00000581025 74 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXS1O43638 BBIP1P1-201ENST00000602999 279 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 Z84480.1-201ENST00000605131 311 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 AL391358.1-201ENST00000605342 190 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXS1O43638 AC040896.1-201ENST00000613819 479 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXS1O43638 AC022106.2-201ENST00000620114 757 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXS1O43638 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXS1O43638 VPS35P1-201ENST00000563400 1518 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXS1O43638 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXS1O43638 SDAD1P1-202ENST00000524156 2051 ntBASIC4.6□□□□□ -1.67
FOXS1O43638 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
FOXS1O43638 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXS1O43638 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms