Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC104332.2-201ENST00000429959 156 ntBASIC2.86□□□□□ -1.95
SGCEO43556 ZNF965P-201ENST00000432501 817 ntBASIC2.86□□□□□ -1.95
SGCEO43556 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.86□□□□□ -1.95
SGCEO43556 ISCA1P2-201ENST00000438679 421 ntBASIC2.86□□□□□ -1.95
SGCEO43556 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.86□□□□□ -1.95
SGCEO43556 XKRY2-201ENST00000442362 1093 ntBASIC2.86□□□□□ -1.95
SGCEO43556 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.86□□□□□ -1.95
SGCEO43556 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.86□□□□□ -1.95
SGCEO43556 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.86□□□□□ -1.95
SGCEO43556 RPS23P3-201ENST00000470993 430 ntBASIC2.86□□□□□ -1.95
SGCEO43556 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SGCEO43556 HIGD1AP1-201ENST00000550979 275 ntBASIC2.86□□□□□ -1.95
SGCEO43556 NCAPGP2-201ENST00000557911 754 ntBASIC2.86□□□□□ -1.95
SGCEO43556 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.86□□□□□ -1.95
SGCEO43556 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.86□□□□□ -1.95
SGCEO43556 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.86□□□□□ -1.95
SGCEO43556 AC073657.2-201ENST00000605661 303 ntBASIC2.86□□□□□ -1.95
SGCEO43556 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.86□□□□□ -1.95
SGCEO43556 AC090617.9-201ENST00000623751 147 ntBASIC2.86□□□□□ -1.95
SGCEO43556 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.86□□□□□ -1.95
SGCEO43556 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.86□□□□□ -1.95
SGCEO43556 MTCO1P12-201ENST00000414273 1543 ntBASIC2.86□□□□□ -1.95
SGCEO43556 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SGCEO43556 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SGCEO43556 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SGCEO43556 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SGCEO43556 MTND5P19-201ENST00000424872 1794 ntBASIC2.85□□□□□ -1.95
SGCEO43556 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SGCEO43556 RNU6-1339P-201ENST00000363574 91 ntBASIC2.85□□□□□ -1.95
SGCEO43556 SNORD115-48-201ENST00000364764 76 ntBASIC2.85□□□□□ -1.95
SGCEO43556 RNU6-1077P-201ENST00000410506 102 ntBASIC2.85□□□□□ -1.95
SGCEO43556 HMGN1P24-201ENST00000412282 298 ntBASIC2.85□□□□□ -1.95
SGCEO43556 RPL7P10-201ENST00000417407 739 ntBASIC2.85□□□□□ -1.95
SGCEO43556 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.85□□□□□ -1.95
SGCEO43556 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.85□□□□□ -1.95
SGCEO43556 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SGCEO43556 AC115115.1-201ENST00000449927 248 ntBASIC2.85□□□□□ -1.95
SGCEO43556 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.85□□□□□ -1.95
SGCEO43556 PLGLA-201ENST00000465668 449 ntBASIC2.85□□□□□ -1.95
SGCEO43556 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.85□□□□□ -1.95
SGCEO43556 AC015724.1-201ENST00000478577 156 ntBASIC2.85□□□□□ -1.95
SGCEO43556 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
SGCEO43556 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.85□□□□□ -1.95
SGCEO43556 AC021678.1-201ENST00000505195 936 ntBASIC2.85□□□□□ -1.95
SGCEO43556 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.85□□□□□ -1.95
SGCEO43556 AC105914.1-201ENST00000511798 226 ntBASIC2.85□□□□□ -1.95
SGCEO43556 RNU6-551P-201ENST00000516661 103 ntBASIC2.85□□□□□ -1.95
SGCEO43556 AC104986.1-201ENST00000517978 436 ntBASIC2.85□□□□□ -1.95
SGCEO43556 DUXAP2-201ENST00000519198 589 ntBASIC2.85□□□□□ -1.95
SGCEO43556 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.85□□□□□ -1.95
SGCEO43556 AL121603.1-201ENST00000553815 142 ntBASIC2.85□□□□□ -1.95
SGCEO43556 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.85□□□□□ -1.95
SGCEO43556 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.85□□□□□ -1.95
SGCEO43556 SNORD84-203ENST00000584275 78 ntBASIC2.85□□□□□ -1.95
SGCEO43556 BDH2P1-201ENST00000602288 736 ntBASIC2.85□□□□□ -1.95
SGCEO43556 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.85□□□□□ -1.95
SGCEO43556 AC018755.4-201ENST00000619715 454 ntBASIC2.85□□□□□ -1.95
SGCEO43556 AC097372.4-201ENST00000625025 466 ntBASIC2.85□□□□□ -1.95
SGCEO43556 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.85□□□□□ -1.95
SGCEO43556 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SGCEO43556 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SGCEO43556 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.85□□□□□ -1.95
SGCEO43556 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SGCEO43556 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.85□□□□□ -1.95
SGCEO43556 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SGCEO43556 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SGCEO43556 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SGCEO43556 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SGCEO43556 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
SGCEO43556 U3.11-201ENST00000364476 212 ntBASIC2.84□□□□□ -1.95
SGCEO43556 OR6K3-202ENST00000368146 996 ntBASIC2.84□□□□□ -1.95
SGCEO43556 RNA5SP229-201ENST00000410809 99 ntBASIC2.84□□□□□ -1.95
SGCEO43556 YPEL5P1-201ENST00000419731 367 ntBASIC2.84□□□□□ -1.95
SGCEO43556 AC233728.2-201ENST00000425348 757 ntBASIC2.84□□□□□ -1.95
SGCEO43556 AC006548.1-201ENST00000427470 102 ntBASIC2.84□□□□□ -1.95
SGCEO43556 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SGCEO43556 AL159987.2-201ENST00000432754 307 ntBASIC2.84□□□□□ -1.95
SGCEO43556 FABP5P3-201ENST00000437960 408 ntBASIC2.84□□□□□ -1.95
SGCEO43556 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.84□□□□□ -1.95
SGCEO43556 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.84□□□□□ -1.95
SGCEO43556 AC140076.1-201ENST00000449897 361 ntBASIC2.84□□□□□ -1.95
SGCEO43556 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.84□□□□□ -1.95
SGCEO43556 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.84□□□□□ -1.95
SGCEO43556 AC108078.3-201ENST00000502633 489 ntBASIC2.84□□□□□ -1.95
SGCEO43556 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.84□□□□□ -1.95
SGCEO43556 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
SGCEO43556 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.84□□□□□ -1.95
SGCEO43556 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.84□□□□□ -1.95
SGCEO43556 AC239860.2-201ENST00000525886 270 ntBASIC2.84□□□□□ -1.95
SGCEO43556 OR4A45P-201ENST00000529954 901 ntBASIC2.84□□□□□ -1.95
SGCEO43556 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.84□□□□□ -1.95
SGCEO43556 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.84□□□□□ -1.95
SGCEO43556 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.84□□□□□ -1.95
SGCEO43556 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.84□□□□□ -1.95
SGCEO43556 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.84□□□□□ -1.95
SGCEO43556 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.84□□□□□ -1.95
SGCEO43556 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.84□□□□□ -1.95
SGCEO43556 RN7SL339P-201ENST00000580597 296 ntBASIC2.84□□□□□ -1.95
SGCEO43556 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.84□□□□□ -1.95
SGCEO43556 AC008739.3-201ENST00000603262 127 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms