Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3B1O00203 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP3B1O00203 RNU1-64P-201ENST00000365443 163 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 SNORA5A-201ENST00000384111 134 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 TMSB4XP8-201ENST00000402089 135 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 AL023807.1-201ENST00000407932 359 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3B1O00203 CYCSP19-201ENST00000411715 316 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3B1O00203 TMSB4XP6-201ENST00000415187 135 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3B1O00203 TMSB4XP1-201ENST00000424567 135 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 RPL7P46-201ENST00000425129 740 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3B1O00203 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3B1O00203 ISCA1P2-201ENST00000438679 421 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.42□□□□□ -1.86
AP3B1O00203 TRIM60P18-201ENST00000441518 828 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 RNFT1P2-201ENST00000443064 757 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 AC005002.1-201ENST00000447458 540 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 Z99127.3-201ENST00000448158 395 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3B1O00203 RPL23AP31-201ENST00000456160 467 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 RPS27P29-201ENST00000463110 252 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 VPS26AP1-201ENST00000483197 979 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP3B1O00203 RNU6-416P-201ENST00000516265 103 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 AP001804.3-201ENST00000525146 880 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 SNRPGP16-201ENST00000533275 226 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP3B1O00203 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3B1O00203 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3B1O00203 BNIP3P5-201ENST00000562290 498 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 MTCO3P24-201ENST00000572729 782 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.42□□□□□ -1.86
AP3B1O00203 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3B1O00203 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3B1O00203 AP001330.4-201ENST00000604350 154 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 AC245100.7-201ENST00000609678 442 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3B1O00203 AC139713.2-210ENST00000641741 992 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 ZNF663P-202ENST00000641770 1131 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3B1O00203 ZNF285B-201ENST00000561698 1767 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 AL645937.1-201ENST00000641739 1652 ntBASIC3.42□□□□□ -1.86
AP3B1O00203 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
AP3B1O00203 AC111188.2-201ENST00000529697 1387 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.41□□□□□ -1.86
AP3B1O00203 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.41□□□□□ -1.86
AP3B1O00203 DYNLT3P1-201ENST00000378574 347 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 RNU6-1074P-201ENST00000383995 104 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 MIR1193-201ENST00000408109 78 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.41□□□□□ -1.86
AP3B1O00203 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.41□□□□□ -1.86
AP3B1O00203 AC012498.1-201ENST00000424037 437 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.41□□□□□ -1.86
AP3B1O00203 AL353705.1-201ENST00000433468 480 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.41□□□□□ -1.86
AP3B1O00203 CDC27P1-201ENST00000445384 715 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 RPL21P23-201ENST00000446654 460 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 AL136126.1-201ENST00000473603 402 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 AC068724.1-201ENST00000487100 792 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 AC096751.1-202ENST00000502691 1067 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.41□□□□□ -1.86
AP3B1O00203 AC111000.2-201ENST00000507775 550 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 AC104619.4-201ENST00000510773 249 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.41□□□□□ -1.86
AP3B1O00203 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
AP3B1O00203 AC126177.3-201ENST00000551839 688 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.41□□□□□ -1.86
AP3B1O00203 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.41□□□□□ -1.86
AP3B1O00203 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.41□□□□□ -1.86
AP3B1O00203 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.41□□□□□ -1.86
AP3B1O00203 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.41□□□□□ -1.86
AP3B1O00203 AL121772.2-201ENST00000614331 297 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 AC243312.2-201ENST00000623340 601 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
AP3B1O00203 AC244258.1-201ENST00000637553 1071 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 FAM35CP-201ENST00000554755 2470 ntBASIC3.41□□□□□ -1.86
AP3B1O00203 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
AP3B1O00203 CUL1P1-201ENST00000509510 2425 ntBASIC3.4□□□□□ -1.86
AP3B1O00203 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
AP3B1O00203 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
AP3B1O00203 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
AP3B1O00203 U3.11-201ENST00000364476 212 ntBASIC3.4□□□□□ -1.87
AP3B1O00203 SNORA73.2-201ENST00000364946 201 ntBASIC3.4□□□□□ -1.87
AP3B1O00203 RNU6-805P-201ENST00000365643 106 ntBASIC3.4□□□□□ -1.87
AP3B1O00203 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.4□□□□□ -1.87
AP3B1O00203 MIR218-2-201ENST00000385006 110 ntBASIC3.4□□□□□ -1.87
AP3B1O00203 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
AP3B1O00203 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.4□□□□□ -1.87
AP3B1O00203 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.4□□□□□ -1.87
AP3B1O00203 AC009237.2-201ENST00000421358 284 ntBASIC3.4□□□□□ -1.87
AP3B1O00203 UBE2D3P2-201ENST00000424409 445 ntBASIC3.4□□□□□ -1.87
AP3B1O00203 USP9YP36-201ENST00000424581 829 ntBASIC3.4□□□□□ -1.87
AP3B1O00203 AL445584.1-201ENST00000431451 330 ntBASIC3.4□□□□□ -1.87
AP3B1O00203 ATP5JP1-201ENST00000431631 322 ntBASIC3.4□□□□□ -1.87
AP3B1O00203 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.4□□□□□ -1.87
AP3B1O00203 AC073063.1-201ENST00000434352 607 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms