Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RN7SL75P-201ENST00000461926 281 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 RN7SL863P-201ENST00000462370 296 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC008379.1-201ENST00000463655 464 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 RN7SL283P-201ENST00000489055 303 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC069306.1-201ENST00000507006 843 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AP003066.2-201ENST00000529375 555 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 H3F3AP1-201ENST00000559984 334 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC124283.4-201ENST00000581815 456 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 ZNF92P3-201ENST00000596594 954 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AP005229.2-201ENST00000609980 697 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC005156.1-201ENST00000613371 573 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AP000943.4-201ENST00000622912 357 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC010872.1-201ENST00000624225 675 ntBASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
TMX2-CTNND1H3BSU7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNA5SP295-201ENST00000362655 121 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNU6-1257P-201ENST00000384625 110 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 RPL21P3-201ENST00000395517 478 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC006960.1-201ENST00000419980 153 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC048351.1-201ENST00000420064 602 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC073310.1-201ENST00000423226 1033 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC236972.1-201ENST00000433225 199 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 MED6P1-201ENST00000439659 713 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 ATP5C1P1-201ENST00000441945 895 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 RPL7P55-201ENST00000450522 746 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 ELOCP23-201ENST00000452014 332 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNU7-27P-201ENST00000459281 62 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC146507.2-201ENST00000460608 476 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC093278.1-201ENST00000494700 600 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC097462.2-201ENST00000504623 481 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC107934.2-201ENST00000518653 310 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 PSMA2P1-201ENST00000526365 646 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AP002812.4-201ENST00000532139 286 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC090666.1-201ENST00000578241 445 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AP001180.3-201ENST00000582221 145 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC067852.3-201ENST00000589177 561 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC006539.2-201ENST00000601729 572 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC112503.2-201ENST00000609005 552 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC006213.4-201ENST00000616184 634 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC243756.2-201ENST00000618406 463 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC048347.1-201ENST00000624621 427 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 U6.107-201ENST00000637108 79 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC107081.3-201ENST00000612715 2034 ntBASIC3.14□□□□□ -1.91
TMX2-CTNND1H3BSU7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNF6P1-201ENST00000444889 1784 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNU6-207P-201ENST00000384137 107 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL122016.1-201ENST00000403365 367 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC105402.1-201ENST00000413336 545 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 RPL31P45-201ENST00000419532 356 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 RPS6P14-201ENST00000425165 719 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 ETF1P3-201ENST00000430422 1160 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 HSFY7P-201ENST00000432672 318 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 OR2B8P-201ENST00000432841 938 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 B3GNT2P1-201ENST00000434960 952 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 HSFY8P-201ENST00000437934 318 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 HSFY5P-201ENST00000453726 309 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms