Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 TPT1P13-201ENST00000449760 499 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 IGHV5-78-201ENST00000450948 295 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 TRBV26-201ENST00000456572 344 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC083798.1-201ENST00000472671 131 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 RPS4XP1-201ENST00000482189 787 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC096576.1-201ENST00000489014 359 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 SNORA19.2-201ENST00000516013 114 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 Vault.3-201ENST00000516676 95 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC105029.1-201ENST00000520250 669 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 ZNF705CP-201ENST00000530515 889 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC008127.2-201ENST00000549925 1075 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC055876.1-202ENST00000567053 138 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 SNORD39.3-201ENST00000584451 71 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 BNIP3P22-201ENST00000593399 556 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC243960.4-201ENST00000600532 288 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AL133173.2-201ENST00000614270 90 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC138649.5-201ENST00000637456 137 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AC011493.1-201ENST00000596753 1632 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 RNU6-657P-201ENST00000383904 107 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 Y_RNA.419-201ENST00000384041 102 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 MIR153-1-201ENST00000384914 90 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 MIR600-201ENST00000385007 98 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AL080315.1-201ENST00000406055 466 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 MRPL50P2-201ENST00000416821 482 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 CYCSP10-201ENST00000417973 294 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 PSMA2P3-201ENST00000429685 675 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 CFL1P1-202ENST00000432948 411 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 RPS3AP54-201ENST00000435535 734 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 RPL35AP21-201ENST00000437667 333 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 RSU1P2-202ENST00000437884 485 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 CBWD4P-201ENST00000445695 655 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AL136380.1-201ENST00000447970 162 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 RPL29P29-201ENST00000448725 423 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 PPIAP3-201ENST00000450588 505 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AL121877.1-201ENST00000453704 622 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 RNU7-136P-201ENST00000458819 69 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AC063943.1-201ENST00000465434 453 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 RN7SL441P-201ENST00000492388 296 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AC105031.1-201ENST00000518550 476 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AP003181.2-201ENST00000528941 181 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AC034105.3-201ENST00000565294 442 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AL355375.2-201ENST00000574825 175 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 RNA5SP108-201ENST00000605921 117 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 DISC2.1-201ENST00000612827 205 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AC024940.5-201ENST00000622889 474 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 MIR1302-1-201ENST00000637932 143 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.04□□□□□ -1.76
CGB1A6NKQ9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CGB1A6NKQ9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms