Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM49BA6NDI0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM49BA6NDI0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM49BA6NDI0 AC007496.3-201ENST00000624987 3443 ntBASIC3.7□□□□□ -1.82
TRIM49BA6NDI0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM49BA6NDI0 ZNF734P-201ENST00000419494 1534 ntBASIC3.7□□□□□ -1.82
TRIM49BA6NDI0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AF127577.6-201ENST00000623352 2191 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 RNU6-600P-201ENST00000362524 99 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 MT-TC-201ENST00000387405 66 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AL138880.1-201ENST00000405824 642 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC246680.2-201ENST00000422106 389 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC093698.1-201ENST00000423843 571 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 C1DP1-201ENST00000426049 402 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AL009174.1-201ENST00000426577 416 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 HMGB3P11-201ENST00000440127 604 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 HSFY3P-201ENST00000444242 1191 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 EXTL2P1-201ENST00000446218 416 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 RPL21P23-201ENST00000446654 460 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 DUXAP8-207ENST00000456786 622 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AL139824.2-201ENST00000458731 1095 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC091564.1-201ENST00000464563 479 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 RPL6P9-201ENST00000466502 859 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 RN7SL442P-201ENST00000473804 320 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 RPS17P11-201ENST00000474297 293 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 RPS4XP22-201ENST00000480755 780 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 OR5B10P-201ENST00000532869 642 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC092470.1-201ENST00000546187 132 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC010735.1-201ENST00000567305 1026 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 MIR4509-3-201ENST00000578671 94 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 BPTFP1-201ENST00000579209 492 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 MIR4509-2-201ENST00000583920 94 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AL445435.1-201ENST00000604232 665 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 MIR7851-201ENST00000610611 160 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC087683.2-201ENST00000611384 326 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 DUXAP10-204ENST00000612052 616 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 MIR4509-1-201ENST00000618224 94 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC006386.1-201ENST00000619436 415 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 MIR6075-201ENST00000620782 95 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC243312.2-201ENST00000623340 601 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC093875.1-201ENST00000623688 504 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AC006963.1-201ENST00000624003 1052 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AL590396.4-201ENST00000636779 956 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 AL392088.2-201ENST00000637607 285 ntBASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49BA6NDI0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 AL359893.1-201ENST00000447628 1580 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 RNU1-75P-201ENST00000347264 129 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 RNU6-1226P-201ENST00000384317 107 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 AC093578.1-201ENST00000415219 368 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 PTP4A1P7-201ENST00000423476 514 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 MTATP6P17-201ENST00000431030 672 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 ARF4P4-201ENST00000439608 520 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 AC006539.3-201ENST00000454258 129 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 NF1P3-201ENST00000457709 450 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 RNU7-140P-201ENST00000459546 60 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 RPL21P104-201ENST00000464143 478 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 SNRPGP3-201ENST00000469405 227 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 Y_RNA.717-201ENST00000517106 92 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 AC007458.1-201ENST00000542812 373 ntBASIC3.68□□□□□ -1.82
TRIM49BA6NDI0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms