Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ZNF285B-201ENST00000561698 1767 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 FAM35CP-201ENST00000554755 2470 ntBASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RHBDD3Q9Y3P4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 AL513302.2-201ENST00000562313 1842 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 FER-202ENST00000438717 1531 ntTSL 2 BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 RNA5SP124-201ENST00000362739 110 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 ATF1P1-201ENST00000406040 927 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 RN7SKP202-201ENST00000410439 330 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 RNU6-712P-201ENST00000410558 100 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 RPS15AP6-201ENST00000420703 385 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 AC009237.2-201ENST00000421358 284 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 RPS6P14-201ENST00000425165 719 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 RN7SL442P-201ENST00000473804 320 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 AC096751.1-202ENST00000502691 1067 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 MTND3P24-201ENST00000506306 329 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 AC111000.2-201ENST00000507775 550 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 AC104619.4-201ENST00000510773 249 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 FABP5P12-201ENST00000515543 389 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 RNU1-95P-201ENST00000516357 160 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 RNU1-128P-201ENST00000516704 160 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 SNORA70.19-201ENST00000516717 90 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 COX6CP3-201ENST00000580869 223 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 AC020914.6-201ENST00000594327 272 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 AC006329.2-201ENST00000611491 394 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 CUL1P1-201ENST00000509510 2425 ntBASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
RHBDD3Q9Y3P4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AL136520.1-201ENST00000600311 1322 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 SNORA14A-201ENST00000364773 135 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 RNU1-64P-201ENST00000365443 163 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 SKINT1L-201ENST00000401057 817 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 CYCSP45-201ENST00000402289 315 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AL445189.1-201ENST00000405722 338 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AL023807.1-201ENST00000407932 359 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 RNU6ATAC-201ENST00000408749 126 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 RNA5SP293-201ENST00000410527 113 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AL133384.1-201ENST00000412744 351 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AC008173.1-201ENST00000418901 264 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 OR1AA1P-201ENST00000419597 916 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 RPL23AP82-202ENST00000427528 469 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 BX890604.2-201ENST00000427883 474 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 RRM2P4-201ENST00000441721 562 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 RPS20P24-201ENST00000457473 361 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 CENPBD1P1-201ENST00000464061 469 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 MLLT10P2-201ENST00000506434 249 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 RNU6-416P-201ENST00000516265 103 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AC104027.1-201ENST00000521887 300 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 ARL2BPP5-201ENST00000523141 481 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 ZNF705CP-201ENST00000530515 889 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 MIR6076-201ENST00000617521 113 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AC091046.2-201ENST00000620775 665 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AC090897.3-201ENST00000636973 1157 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AL049780.3-201ENST00000624612 1583 ntBASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.99□□□□□ -1.93
RHBDD3Q9Y3P4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 SNORA5A-201ENST00000384111 134 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms