Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 RPL23AP22-201ENST00000437556 453 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 NECAP1P2-201ENST00000455668 727 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 RPS4XP2-201ENST00000458402 793 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 snoU109.4-201ENST00000458953 143 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC084357.1-201ENST00000473404 255 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC013828.1-201ENST00000481845 158 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AP000563.1-201ENST00000490865 758 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC008427.1-201ENST00000503102 655 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 KCTD9P5-201ENST00000504141 1170 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC004062.1-201ENST00000509926 645 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 RN7SKP21-201ENST00000516503 220 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 NDUFS5P6-201ENST00000529136 295 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC026333.2-201ENST00000542164 106 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC090502.2-201ENST00000549267 280 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC120057.2-201ENST00000571520 271 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC034268.2-201ENST00000571784 482 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 ARF4P1-201ENST00000605447 541 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AL159169.3-201ENST00000608871 561 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC010975.3-201ENST00000618727 978 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC018755.4-201ENST00000619715 454 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AL360181.4-201ENST00000621752 134 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AP003476.1-201ENST00000623984 516 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC112484.5-201ENST00000624189 228 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC126544.2-201ENST00000625174 749 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 MFSD8-245ENST00000641743 948 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 AC007656.2-201ENST00000624902 4547 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 MTCO1P23-201ENST00000415223 1526 ntBASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.97□□□□□ -1.93
KCNIP3Q9Y2W7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
KCNIP3Q9Y2W7 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.96□□□□□ -1.93
KCNIP3Q9Y2W7 AC012618.3-205ENST00000637896 1496 ntBASIC2.96□□□□□ -1.93
KCNIP3Q9Y2W7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
KCNIP3Q9Y2W7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC007823.1-201ENST00000569932 1566 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC016769.3-201ENST00000396562 315 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 MTCO1P56-201ENST00000401674 224 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 RNU2-28P-201ENST00000410457 189 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 RN7SKP123-201ENST00000410732 291 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 RNA5SP31-201ENST00000411144 127 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC126124.2-201ENST00000413542 321 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 PTP4A1P7-201ENST00000423476 514 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 C1DP1-201ENST00000426049 402 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 DPRXP1-201ENST00000426312 460 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 MTCYBP42-201ENST00000444653 1130 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 NUTF2P3-201ENST00000448540 384 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 HMGN1P18-201ENST00000457642 277 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 RPS27AP1-201ENST00000475545 471 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC007686.1-201ENST00000488511 463 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 RPS4XP15-201ENST00000489210 795 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC096751.1-202ENST00000502691 1067 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 RNU6-27P-201ENST00000516146 107 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 RNU6-1028P-201ENST00000517164 93 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC107934.2-201ENST00000518653 310 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AP006245.1-201ENST00000522549 120 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC018630.1-201ENST00000541376 925 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC126177.3-201ENST00000551839 688 ntBASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.96□□□□□ -1.94
KCNIP3Q9Y2W7 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms