Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 VN1R10P-201ENST00000447106 875 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 RPS15AP1-201ENST00000457423 391 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC091564.1-201ENST00000464563 479 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 RPL7P24-201ENST00000493052 752 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC023424.2-201ENST00000493479 777 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC025445.1-201ENST00000502728 300 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 RN7SKP122-201ENST00000515923 296 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 OR4A45P-201ENST00000529954 901 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 EEF1B2P4-201ENST00000551398 348 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AL389895.1-201ENST00000554127 252 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 OR4G1P-201ENST00000588632 938 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AL022154.1-201ENST00000604698 785 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AL590392.1-201ENST00000604960 446 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC006566.1-201ENST00000608943 513 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC109347.2-201ENST00000610220 349 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 SEPT14P19-203ENST00000633205 211 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.68
DKK3Q9UBP4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
DKK3Q9UBP4 RAD17P1-201ENST00000418130 2042 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 MTCYBP36-201ENST00000404146 440 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 HMGB1P11-201ENST00000413899 637 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC004552.1-201ENST00000419089 348 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC004975.1-201ENST00000428733 208 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AL353572.1-201ENST00000442490 417 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC097493.1-201ENST00000463958 372 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 RPS26P3-201ENST00000470205 348 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 TMED11P-201ENST00000479478 690 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC090543.2-201ENST00000483963 348 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC004057.1-201ENST00000485827 348 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 LARP1BP2-201ENST00000486594 519 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC021678.1-201ENST00000505195 936 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 RN7SKP21-201ENST00000516503 220 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 RN7SKP244-201ENST00000516513 307 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC025881.1-201ENST00000518851 512 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 MED28P5-201ENST00000528254 438 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC068587.4-201ENST00000533893 186 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AGGF1P8-201ENST00000562979 1000 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 TPRKBP2-201ENST00000565969 475 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC008687.2-201ENST00000597865 520 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 SEPT7P9-203ENST00000604116 343 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC067959.1-201ENST00000604334 379 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AP001596.2-201ENST00000608410 312 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 CR392039.4-201ENST00000624968 501 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC068724.3-201ENST00000625906 87 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DKK3Q9UBP4 MTND5P26-201ENST00000426018 1752 ntBASIC4.58□□□□□ -1.68
DKK3Q9UBP4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 MARK2P15-201ENST00000432204 2186 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 MTND4P16-201ENST00000466108 1367 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 CPHL1P-201ENST00000461341 3407 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 MIR659-201ENST00000384963 97 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 HMGN1P14-201ENST00000412459 517 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC008280.1-201ENST00000418851 412 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms