Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PRDX3P4-201ENST00000470828 747 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 RPS26P21-201ENST00000475397 348 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 RN7SL20P-201ENST00000488827 297 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AC004062.1-201ENST00000509926 645 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 RN7SKP282-201ENST00000516824 299 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AL669831.4-202ENST00000590817 238 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 OR2BH1P-201ENST00000608850 864 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AL390240.1-201ENST00000612950 384 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AL162233.1-201ENST00000620014 944 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AL590240.3-201ENST00000621416 943 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AC002546.1-201ENST00000588041 2504 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AL353743.1-202ENST00000431724 1695 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 OR1S2-201ENST00000302592 978 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 RNA5SP50-201ENST00000363731 107 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 RNU1-33P-201ENST00000364249 162 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AL445189.1-201ENST00000405722 338 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AL031121.1-201ENST00000406553 254 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 RNA5SP56-201ENST00000410277 118 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 TATDN1P1-201ENST00000414123 891 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 OR1AA1P-201ENST00000419597 916 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 HMGN2P31-201ENST00000432430 273 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 FABP5P3-201ENST00000437960 408 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 RPS27P23-201ENST00000487608 251 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AC104108.1-201ENST00000509930 412 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 RNU1-61P-201ENST00000516107 151 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 RNA5SP468-201ENST00000516782 93 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 RNU1-45P-201ENST00000517191 141 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 SNORA31.26-201ENST00000517250 137 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 OR8I1P-201ENST00000529291 931 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AP003385.6-201ENST00000531603 374 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AC055876.1-202ENST00000567053 138 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 MTCO3P24-201ENST00000572729 782 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AC005412.1-201ENST00000580812 1049 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 MIR4697-201ENST00000582977 78 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 PRELID3BP8-201ENST00000604148 295 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 AC068620.4-201ENST00000636730 1182 ntBASIC2.92□□□□□ -1.94
VAPAQ9P0L0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VAPAQ9P0L0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC103988.1-201ENST00000566382 2177 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AL161912.2-201ENST00000565707 3007 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC116096.1-201ENST00000566804 2314 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC004925.1-201ENST00000624256 2706 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC234772.1-201ENST00000377927 937 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 UBE2V1P11-201ENST00000411559 285 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC109780.2-201ENST00000413467 845 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 RAD23BP2-201ENST00000416003 1207 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 RPS3AP9-201ENST00000417027 792 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 RPL21P40-201ENST00000428586 483 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 MTND4LP7-201ENST00000431728 294 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC005019.1-201ENST00000436455 431 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 RABEPKP1-201ENST00000440529 1026 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 RPS26P30-201ENST00000443431 335 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 RPL17P49-201ENST00000443728 411 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AP004217.1-201ENST00000480579 346 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms