Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 MTND3P24-201ENST00000506306 329 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 RNU6-711P-201ENST00000517255 106 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 HMGB1P1-201ENST00000522557 636 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 AC026333.2-201ENST00000542164 106 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 AC011611.5-201ENST00000552477 578 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 RN7SL339P-201ENST00000580597 296 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 AC133794.1-201ENST00000602731 914 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 AC025588.3-201ENST00000604182 274 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 AL159169.3-201ENST00000608871 561 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 AC068831.7-201ENST00000616954 363 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 AL357559.1-201ENST00000622228 274 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 CR381572.1-201ENST00000625098 102 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 MFSD8-233ENST00000641482 4860 ntBASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.27□□□□□ -1.89
KLHL28Q9NXS3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 MIR218-2-201ENST00000385006 110 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 RPL31P1-201ENST00000398116 372 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 RAD23BP2-201ENST00000416003 1207 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC104073.1-201ENST00000451988 151 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 CDC42P1-201ENST00000456658 548 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 RPL21P8-201ENST00000465083 535 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC010301.1-201ENST00000473936 355 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC017015.1-201ENST00000477387 286 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC010265.1-201ENST00000513509 211 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AP006245.1-201ENST00000522549 120 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 OR8K2P-201ENST00000524645 927 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 MIR8084-201ENST00000614105 89 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC090116.1-201ENST00000615679 446 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC015967.1-201ENST00000619893 476 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC098679.5-201ENST00000624394 571 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AC091948.2-201ENST00000636510 279 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 AL365440.1-201ENST00000436135 2167 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 ZNF826P-207ENST00000622273 1910 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 SGO1P1-201ENST00000603525 1447 ntBASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KLHL28Q9NXS3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 MIR16-1-201ENST00000385271 89 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 RNU6-55P-201ENST00000411092 107 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 RNU6-954P-201ENST00000411355 107 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 MTCO3P12-201ENST00000416718 547 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 PRDX3P3-201ENST00000447765 522 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 CYCSP35-201ENST00000451978 304 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 SNORD105B-201ENST00000458770 79 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 RPS23P3-201ENST00000470993 430 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 RN7SL293P-201ENST00000481765 281 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 FABP5P12-201ENST00000515543 389 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AC107934.2-201ENST00000518653 310 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AL355812.1-201ENST00000603215 216 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms