Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 OR5BR1P-201ENST00000524992 1330 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 RNU6-657P-201ENST00000383904 107 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 SNORD116-9-201ENST00000384000 95 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 SNORD116-3-201ENST00000384287 95 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 SNORD116-7-201ENST00000384404 95 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 SNORD116-5-201ENST00000384462 95 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AL121978.1-201ENST00000402778 359 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 MIR1284-201ENST00000408337 120 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 RNU2-28P-201ENST00000410457 189 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 USP9YP33-201ENST00000412220 421 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 HSFY4P-201ENST00000415994 1181 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC008280.1-201ENST00000418851 412 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 SEPT2P1-201ENST00000419651 180 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AL117339.2-201ENST00000430475 180 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 B3GNT2P1-201ENST00000434960 952 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 USP9YP35-201ENST00000435696 412 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 THAP5P1-201ENST00000439089 262 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 HMGN3P1-201ENST00000453847 193 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC103987.1-201ENST00000473394 348 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 RPL7P38-201ENST00000488396 739 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 MTCYBP17-201ENST00000503579 789 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 MTND1P22-201ENST00000510572 951 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 RNU6-678P-201ENST00000516832 109 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC008802.1-201ENST00000519121 791 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 IGLVIV-53-201ENST00000520107 367 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC027309.2-201ENST00000520566 192 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 TOMM20P2-201ENST00000540082 421 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC020910.2-201ENST00000603635 610 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC091946.2-201ENST00000606105 291 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC004223.4-201ENST00000612426 332 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC139792.2-201ENST00000624218 587 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC120349.2-201ENST00000625002 298 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AC092184.1-201ENST00000625042 715 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 RNA5SP196-201ENST00000625967 102 ntBASIC4.01□□□□□ -1.77
PCDH9Q9HC56 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDH9Q9HC56 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDH9Q9HC56 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDH9Q9HC56 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4□□□□□ -1.77
PCDH9Q9HC56 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDH9Q9HC56 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDH9Q9HC56 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4□□□□□ -1.77
PCDH9Q9HC56 RNU6-251P-201ENST00000363235 104 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 Y_RNA.318-201ENST00000365131 97 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 RNU6-1122P-201ENST00000384449 107 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 MIR124-3-201ENST00000384866 87 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4□□□□□ -1.77
PCDH9Q9HC56 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDH9Q9HC56 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4□□□□□ -1.77
PCDH9Q9HC56 DNAJA1P2-201ENST00000421360 1197 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4□□□□□ -1.77
PCDH9Q9HC56 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDH9Q9HC56 OR6C5P-201ENST00000452388 923 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AC098824.1-201ENST00000453565 980 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AC072039.1-201ENST00000477611 581 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AC012170.1-201ENST00000495139 359 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 FTH1P24-201ENST00000503502 462 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4□□□□□ -1.77
PCDH9Q9HC56 OR5BM1P-201ENST00000512021 366 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms