Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 MTND4P16-201ENST00000466108 1367 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 FGF7P2-201ENST00000332473 296 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 MIR331-201ENST00000362302 94 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 RNA5SP391-201ENST00000363456 119 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 MIR649-201ENST00000384843 97 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 SNRPEP2-201ENST00000397592 279 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 SNORA11F-201ENST00000408237 128 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC007899.1-201ENST00000412776 775 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 NANOGP6-201ENST00000429190 847 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 VN1R10P-201ENST00000447106 875 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 IFNWP4-201ENST00000453148 294 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 CFTRP1-201ENST00000456646 183 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 MTCO3P2-201ENST00000457365 171 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC011825.1-201ENST00000484967 388 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC104164.2-201ENST00000496953 495 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 VWA8P1-201ENST00000510889 176 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 RNA5SP216-201ENST00000516111 123 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 CYP4A43P-201ENST00000568156 121 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC010546.1-201ENST00000569391 485 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 EIF1P4-201ENST00000572664 335 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC011477.5-201ENST00000586571 259 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC073648.5-201ENST00000603502 305 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AL354984.3-201ENST00000604803 325 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AL031666.3-201ENST00000609320 1006 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AL359535.1-201ENST00000612100 1087 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AL357080.1-201ENST00000617394 239 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 MIR6864-201ENST00000617935 70 ntBASIC4.44□□□□□ -1.7
USP29Q9HBJ7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 AC012020.1-201ENST00000624541 1728 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 OR5P1P-201ENST00000299512 925 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 Y_RNA.3-201ENST00000362331 103 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 Y_RNA.126-201ENST00000363382 111 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 Y_RNA.517-201ENST00000384551 106 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 RPS26P8-201ENST00000393490 348 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 RPS23P10-201ENST00000416185 486 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AL031667.1-201ENST00000440222 725 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 CDC27P1-201ENST00000445384 715 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 APOOP2-201ENST00000461561 539 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 RN7SL98P-201ENST00000462271 300 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC091564.1-201ENST00000464563 479 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 RPL23AP2-201ENST00000471227 466 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC010301.1-201ENST00000473936 355 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 ARL2BPP4-201ENST00000506854 471 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC006499.6-201ENST00000511169 607 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 IGLVIV-65-201ENST00000517313 360 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC090281.1-201ENST00000523019 276 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC091489.2-201ENST00000566263 604 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 MIR3138-201ENST00000585238 82 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC093227.2-201ENST00000589357 285 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AP000403.1-201ENST00000603349 851 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 MIR432-201ENST00000606207 94 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC087241.4-201ENST00000612441 480 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AC078899.5-201ENST00000612475 178 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 Z99129.1-201ENST00000612510 255 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms